Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0229 |
Symbol | |
ID | 4250687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 244878 |
End bp | 245624 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638116781 |
Product | heme exporter protein CcmC |
Protein accession | YP_732367 |
Protein GI | 113968574 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0706055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000357328 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTGGAAAT GGTTACACCC TTACGCGGAT CCTGAACGCG CTTACAAATT ATCAGGAACG TTATTTCCAT GGTTTGCTAC CCTAGCCTGT CTTTTTATTA CCGTAGGCAC CGTTTGGGGA TTGATGTTTG CCCCAACAGA TTACCAACAG GGTGATAGCT ACCGTATCAT CTTTATCCAC GTTCCAGCCG CTTCTATGTC GATGGCAGCT TATATGGGGA TGGCGACAGC GGCATTTATC GGTTTAGTCT GGCAAGTTAA ACTGGCAGAC TGGGCAGCCG CTTCTATTGC GCCTATCGGT GCAGTAATCA CCTTTATTGC CCTCTTTACT GGTGCCGCTT GGGGTAAACC CATGTGGGGC ACTTGGTGGG TATGGGATGC GCGTCTGACC TCTGAATTAG TACTACTATT CCTCTACTTA GGTGTGATTT CACTCTACGC TTCTTTTGAG GATAAAGTTC TCGCCGCGCG TGCAGCAGGG ATCTTAGCGA TCGTTGGCGT GATCAACATT CCGATCATCA AATACTCAGT GGAATGGTGG AGCTCACTGC ACCAACCCTC CACCATTAAA ATTACCTCTA AATCGACTAT GTCGAGTGAA ATGTTGTACC CACTTTTAAT CAATATTTTA GGTTTCGGCC TTATGATAGG GGCTATCACT ATTGTGAGAT TTAGAGCAGA AATCTTAGCA AGAAACGGCA TGCGCCCCTG GGTGCGTGAA CTTGCCAAAG CTGAGGAGGT CAAATAA
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Protein sequence | MWKWLHPYAD PERAYKLSGT LFPWFATLAC LFITVGTVWG LMFAPTDYQQ GDSYRIIFIH VPAASMSMAA YMGMATAAFI GLVWQVKLAD WAAASIAPIG AVITFIALFT GAAWGKPMWG TWWVWDARLT SELVLLFLYL GVISLYASFE DKVLAARAAG ILAIVGVINI PIIKYSVEWW SSLHQPSTIK ITSKSTMSSE MLYPLLINIL GFGLMIGAIT IVRFRAEILA RNGMRPWVRE LAKAEEVK
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