| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0210 |
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| Symbol | rplX |
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| ID | 4250932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 234903 |
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| End bp | 235217 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638116762 |
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| Product | 50S ribosomal protein L24 |
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| Protein accession | YP_732348 |
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| Protein GI | 113968555 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0198] Ribosomal protein L24 |
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| TIGRFAM ID | [TIGR01079] ribosomal protein L24, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000216375 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000129617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCAGCTA AAATCCGTCG TCAAGACGAA GTAATCGTAT TAGCAGGTAA AGACAAGGGC
AAACGCGCTA AAGTTGCTCA AGTATTACCT ACTGGTAAGT TAATTGTTGA AGGCATCAAT
CTTGTCAAGA AACACCAAAA GCCAAACCCA CAACTGGGTG TAGCCGGTGG TATTGTTGAG
AAAGAAGCAC CGATTCAAGC ATCAAATGTT GCGATCTTTA ACCCTGTCAC TGGCAAGGCG
GATCGTGTTG GTTTCCGATT TGAAGACGGC AAAAAAGTTC GTTTCTTCAA ATCGAACAGT
GAACTCGTTA AGTAA
|
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| Protein sequence | MAAKIRRQDE VIVLAGKDKG KRAKVAQVLP TGKLIVEGIN LVKKHQKPNP QLGVAGGIVE
KEAPIQASNV AIFNPVTGKA DRVGFRFEDG KKVRFFKSNS ELVK
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