| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0198 |
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| Symbol | rpsJ |
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| ID | 4250920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 229397 |
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| End bp | 229708 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638116750 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_732336 |
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| Protein GI | 113968543 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000200655 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000157318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCTTA AAAGGATTTG ATCATCGCTT AATTGATCAG
TCTACAGCGG AAATCGTTGA AACTGCTAAG CGTACAGGCG CCCAGGTACG TGGTCCTATC
CCACTGCCAA CGCGCAAAGA GCGTTATACC GTTTTGATCT CTCCGCACGT TAATAAAGAT
GCTCGTGACC AGTACGAATT ACGTACTCAC AAGCGCCTGG TTGACATCGT AGAGCCAACT
GAAAAGACTG TAGACGCTCT AATGCGTTTA GATCTTGCGG CTGGTGTCGA CGTACAGATT
AGCTTGGGTT AA
|
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| Protein sequence | MQNQRIRIRL KGFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERYT VLISPHVNKD
ARDQYELRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
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