| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0197 |
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| Symbol | |
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| ID | 4250919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 227874 |
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| End bp | 229058 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116749 |
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| Product | elongation factor Tu |
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| Protein accession | YP_732335 |
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| Protein GI | 113968542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0050] GTPases - translation elongation factors |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000553237 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000241033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGCAAAAG CTAAATTTGA ACGTAATAAG CCTCACGTAA ACGTGGGCAC CATCGGTCAC
GTTGACCATG GTAAAACCAC TCTGACTGCA GCTATCTCTC ACGTACTGGC TAAGACCTAC
GGTGGTGAAG CTAAAGACTT CTCTCAAATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACCATCA ATACCTCTCA CATCGAATAC GATACACCAA CTCGTCACTA CGCACACGTA
GACTGCCCAG GCCACGCTGA CTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCGATCC TGGTAGTAGC TTCTACTGAC GGTCCAATGC CACAAACTCG TGAGCACATC
CTGCTGTCTC GCCAAGTAGG CGTACCTTTC ATCATCGTAT TCATGAACAA GTGTGACATG
GTTGACGATG CTGAACTGTT AGAATTAGTA GAAATGGAAG TACGTGAACT GTTATCAGAA
TACGACTTCC CAGGTGATGA CTTACCAGTT ATCCAAGGTT CTGCTCTGAA AGCGCTAGAA
GGCGAGCCAG AGTGGGAAGC TAAGATCATC GAATTAGCAG CGGCACTGGA TTCTTACATT
CCAGAACCAG AGCGTGATAT CGATAAGCCA TTCCTGATGC CAATCGAAGA CGTATTCTCA
ATCTCTGGCC GTGGTACAGT AGTAACTGGC CGTGTTGAGC GTGGTATCGT ACGTGTTGGT
GACGAAGTAG AAATCGTTGG TATCCGTACA ACGACTAAGA CAACCTGTAC TGGTGTTGAA
ATGTTCCGTA AGCTGCTTGA CGAAGGTCGT GCAGGTGAGA ACTGTGGTAT CCTGTTACGT
GGTACTAAGC GTGATGACGT AGAACGTGGT CAAGTATTAT CTAAGCCAGG TTCAATCAAC
CCACACACTA CTTTTGAATC AGAAGTATAC GTTCTGTCAA AAGAAGAAGG TGGTCGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTGACTGGT
ACCATCGAAC TGCCAGAAGG CGTAGAGATG GTAATGCCAG GCGACAACAT CAAGATGGTT
GTTACGCTGA TCTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCAAT CCGTGAAGGT
GGCCGTACAG TAGGTGCAGG TGTTGTAGCT AAGATCATCG CTTAA
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| Protein sequence | MAKAKFERNK PHVNVGTIGH VDHGKTTLTA AISHVLAKTY GGEAKDFSQI DNAPEERERG
ITINTSHIEY DTPTRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDAELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKII ELAAALDSYI PEPERDIDKP FLMPIEDVFS ISGRGTVVTG RVERGIVRVG
DEVEIVGIRT TTKTTCTGVE MFRKLLDEGR AGENCGILLR GTKRDDVERG QVLSKPGSIN
PHTTFESEVY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNIKMV
VTLICPIAMD EGLRFAIREG GRTVGAGVVA KIIA
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