Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0196 |
Symbol | |
ID | 4250918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 225706 |
End bp | 227802 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116748 |
Product | elongation factor G |
Protein accession | YP_732334 |
Protein GI | 113968541 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000160004 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000014201 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTCGTA CAACCCCAAT TGAGCGTTAT CGTAATATCG GTATTTGTGC TCATGTGGAT GCAGGTAAAA CCACCACAAC AGAACGTGTT CTGTTCTATA CCGGTTTGTC TCATAAAATC GGTGAGGTGC ATGACGGCGC CGCGACCACT GACTGGATGG TACAAGAGCA AGAGCGTGGT ATTACTATCA CCTCGGCTGC TGTAACTACA TTCTGGCGTG GTATGGATGC TCAATTCACT GAACACCGCA TCAATATCAT CGATACCCCT GGTCACGTTG ACTTCACTAT TGAAGTTGAA CGTTCTTTGC GCGTTCTTGA CGGCGCTGTA GTGGTTTTCT GTGGTTCTTC AGGTGTTGAG CCTCAATCAG AAACCGTATG GCGTCAAGCT GACAAATACC GCGTTCCACG CTTAGTGTTT GTCAACAAAA TGGACCGCGC AGGTGCGGAC TTTGAACGTG TAGTGAAGCA AATCAGAACT CGCTTGGGAG CGACTTGTGT TCCGATCCAA TTAAACATCG GTGCAGAAGA AAACTTTACA GGCGTGATCG ACTTAATCAA GATGAAAGCC ATTAACTGGA ACGAAGCGGA CCAGGGTATG ACTTTCACTT ATGAAGAGAT CCCTGCAAGT TTGGCGGCAA AAGCGGCTGA AATGCATGAG TATCTGGTTG AGGCAGCTGC CGAGGCCTCT GATGAACTGA TGGACAAGTA CCTTGAAGAA GGCACACTGT CAGAAGACGA GATCAAAAAG GCACTGCGTC AGCGTACTAT TAATAATGAA ATCGTTTTAG CGACCTGTGG TTCTGCGTTT AAGAACAAAG GCGTTCAAGC GGTTCTTGAT GCGGTAGTAG AATTCTTGCC TGCCCCCGTC GATGTGCCTC CTATTAAGGG CATTGATGAC GATGAGCAAG AAGTTGAACG CCCATCAGAT GACAATGCCC CCTTTGCGGC GTTGGCATTT AAGATTGCTA CAGACCCGTT CGTGGGCACT TTGACCTTTA TTCGCGTGTA CTCTGGCGTA CTCGAATCAG GTTCTGGCGT TTATAACTCT GTTAAACAGA AACGTGAACG TATCGGCCGT ATCGTGCAAA TGCACGCTAA TGACCGTACA GAACTGAAAG AAGTTCGTGC AGGTGATATC GCTGCGGCTA TCGGTCTGAA AGAAGTCACC ACGGGTGATA CACTTTGTGA TCCTGATCAT AAGGTGATCT TGGAACGCAT GGAGTTCCCT GAGCCAGTAA TTACCATTGC CGTTGAGCCT AAGTCTAAAG CAGACCAAGA TAAAATGGGT ATCGCGCTGC AAAAACTCGC AGCGGAAGAT CCATCCTTCC GGGTTGAGAC TGACGAAGAA TCATCACAAA CACTGATTTC TGGAATGGGT GAGTTACACT TAGACATTAT CGTTGACCGT ATGCGTCGCG AATTTGGTGT TGAGTGTAAC GTTGGTAAGC CACAAGTGGC CTACCGCGAA ACCATTCGCG CATCAGTCGA GGCTGAAGGT AAATTTGTAC GCCAATCAGG TGGCCGTGGA CAATTCGGTC ATGTTTGGTT AAAACTAGAG CCTAATGAAG AAGGCGCTGG TTACGAATTT ATCAACGCGA TCGTTGGGGG TGTAGTTCCA CGTGAATTCA TTCCAGCGGT TGATAAAGGT ATCCAAGAGC AGATGAAGAA CGGTGTTCTC GCCGGCTTCC CTGTGTTGGA CGTGAAGGTC ACTCTGTTCG ACGGTTCATA TCACGATGTG GACTCGAATG AAATGGCGTT CAAAATTGCG GGTTCTATGG GCTTCAAAAA GGGTGCGCTC GAAGCGAATC CTGTGTTGCT CGAGCCTTGC ATGAAAGTAG AAGTAACTAC TCCTGAGAAC TACATGGGCG ATGTGGTTGG TGACTTAAAC CGTCGTCGTG GTTTGATTGA AGGTATGGAT GATGGCTTCG GTGGCATCAA AATAGTCCAT GCGGTAGTGC CTCTTTCTGA AATGTTTGGT TATGCAACTG ATTTGCGTTC TGCGACTCAG GGTCGTGCTT CTTACTCCAT GGAGTTTTTG AAGTACTCTG ATGCACCGCA AAACATTGCG AAAGCGATTA TTGAATCTCG TAGCTAA
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Protein sequence | MARTTPIERY RNIGICAHVD AGKTTTTERV LFYTGLSHKI GEVHDGAATT DWMVQEQERG ITITSAAVTT FWRGMDAQFT EHRINIIDTP GHVDFTIEVE RSLRVLDGAV VVFCGSSGVE PQSETVWRQA DKYRVPRLVF VNKMDRAGAD FERVVKQIRT RLGATCVPIQ LNIGAEENFT GVIDLIKMKA INWNEADQGM TFTYEEIPAS LAAKAAEMHE YLVEAAAEAS DELMDKYLEE GTLSEDEIKK ALRQRTINNE IVLATCGSAF KNKGVQAVLD AVVEFLPAPV DVPPIKGIDD DEQEVERPSD DNAPFAALAF KIATDPFVGT LTFIRVYSGV LESGSGVYNS VKQKRERIGR IVQMHANDRT ELKEVRAGDI AAAIGLKEVT TGDTLCDPDH KVILERMEFP EPVITIAVEP KSKADQDKMG IALQKLAAED PSFRVETDEE SSQTLISGMG ELHLDIIVDR MRREFGVECN VGKPQVAYRE TIRASVEAEG KFVRQSGGRG QFGHVWLKLE PNEEGAGYEF INAIVGGVVP REFIPAVDKG IQEQMKNGVL AGFPVLDVKV TLFDGSYHDV DSNEMAFKIA GSMGFKKGAL EANPVLLEPC MKVEVTTPEN YMGDVVGDLN RRRGLIEGMD DGFGGIKIVH AVVPLSEMFG YATDLRSATQ GRASYSMEFL KYSDAPQNIA KAIIESRS
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