| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0191 |
|---|
| Symbol | rplL |
|---|
| ID | 4250736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 215570 |
|---|
| End bp | 215941 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638116743 |
|---|
| Product | 50S ribosomal protein L7/L12 |
|---|
| Protein accession | YP_732329 |
|---|
| Protein GI | 113968536 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0222] Ribosomal protein L7/L12 |
|---|
| TIGRFAM ID | [TIGR00855] ribosomal protein L7/L12 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000396495 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00119483 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATCA CTAAAGACCA AATCTTAGAA GCCTTTGCAG CTATGTCTGT AATGGAAGTT
GTTGAACTGA TCGAAGCTAT GGAAGAGAAG TTCGGCGTTT CTGCTGCTGC TGCAGTAGTT
GCTGGCGGTG CTGCTGATGC AGGTGCTGCT GCTGAAGAAC AAACAGAATT CAACGTAATT
CTGACTGCTC ACGGCGACAA CAAAGTTGCT GTTATTAAAG CAATCCGTGG CGCAACTGGT
TTAGGCCTGA AAGAAGCTAA AGCAATGTCT GAAGCTGCTC CAGTAGCAGT TAAAGAAGGC
GTTTCTAAAG AAGAAGCTGA AGCTCTGAAG AAAGAACTGG TTGAAGCTGG TGCTACAGTA
GAGATCAAGT AA
|
|---|
| Protein sequence | MSITKDQILE AFAAMSVMEV VELIEAMEEK FGVSAAAAVV AGGAADAGAA AEEQTEFNVI
LTAHGDNKVA VIKAIRGATG LGLKEAKAMS EAAPVAVKEG VSKEEAEALK KELVEAGATV
EIK
|
|---|
| |