| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0186 |
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| Symbol | secE |
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| ID | 4250731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 212554 |
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| End bp | 212925 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116738 |
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| Product | preprotein translocase subunit SecE |
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| Protein accession | YP_732324 |
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| Protein GI | 113968531 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0690] Preprotein translocase subunit SecE |
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| TIGRFAM ID | [TIGR00964] preprotein translocase, SecE subunit, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000826672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00751304 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAACAA ATACTGAAAA CCAGACTAAC TCTCTGGATA TCGTGAAGTG GGGTTTAGCG
ATCCTATTGC TGGCCGCTGC TGTTATTGGC AATCAAATGT ATAGCGAGAC AAGTGCCGTG
ATCCGTGCAC TGGCTGTTAT CGTTGCATTC GCTATTGCTG GTTTTATTGC CCTGCAAACA
GAAAAGGGTA AGAAAGCCTT AGCGTTTGCT CGTGAGTCGC AAATTGAAGT GCGCAAGGTC
GTATGGCCGA CGCGTCAAGA AGCGCTTAAC ACCACTTTTA TTGTCCTTGC TGCAACAGGT
ATTTTAGCCC TTGTTTTATG GGGTTTAGAT GCTGTGTTAA TGCACATTGT CAATTTCATC
ACTGGCGTAT AG
|
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| Protein sequence | MTTNTENQTN SLDIVKWGLA ILLLAAAVIG NQMYSETSAV IRALAVIVAF AIAGFIALQT
EKGKKALAFA RESQIEVRKV VWPTRQEALN TTFIVLAATG ILALVLWGLD AVLMHIVNFI
TGV
|
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