| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0183 |
|---|
| Symbol | |
|---|
| ID | 4250728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 209430 |
|---|
| End bp | 210380 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638116731 |
|---|
| Product | pantothenate kinase |
|---|
| Protein accession | YP_732321 |
|---|
| Protein GI | 113968528 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1072] Panthothenate kinase |
|---|
| TIGRFAM ID | [TIGR00554] pantothenate kinase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000066395 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0569679 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCAA AAAATCCAAT TCAAAAAGCA CTCTACCTTG CCTTTGAGCG CGCACAATGG
TCTGTTTTAC GGGACGCAGT GCCGATGACA CTGAGTGAAC AAGACTTGGA AAATTTACGC
GGTATCAATG AGAAGGTTTC ACTTACTGAA GTGACCGATA TTTACCTGCC TCTCAGTAGG
TTACTTAATC TCATTGTTAA AGCGAAACAA CAACGCGGCT TAGTTTTGGA TGAGTTTCTC
GGCCAAAAAC CTTCGAGTAG TCCTTATATC ATTAGCATTG CTGGCAGCGT TGCCGTGGGG
AAAAGTACCA CAGCGCGTAT TTTGCAAGCA TTGCTGCGCC ACTGGCCTGA GCATCCAAAA
GTCGATTTAG TCACTACCGA TGGTTTTTTG TATCCTTTGG CCGACTTAAA ACGCAAGGGA
TTACTGCAAC GTAAAGGCTT CCCCGAAAGC TACGATATGA AGATGTTGGT CGAATTTATT
GCGGCAGTAA AATCGGGGCA AGCCCATGTG AATGCGCCTA TCTATTCCCA CGTGACTTAC
GATCGTATTC GCGGCCAGCA TCAGACAGTT TCTCAGCCCG ATATTTTGAT CCTAGAAGGA
CTCAATGTAC TGCAAACCGG CTTAGATTCA CCAGTAGATA TACGTCGTCC CTTTGTTTCC
GACTTTGTCG ACTTCTCTAT TTATGTCGAT GCCGAAGAGC ACTTATTAAA GCAATGGTAT
CAAGAGCGCT TTCTGCAATT CCGCAAAGGC GCTTTCAGTG ATGAAAAGTC TTATTTCCAT
CACTACGCCA GCCTAACGGA TGATGAGGCC AATGTGATTG CTGCGAAGAT TTGGGACACT
ATCAACGGCC CCAATCTGCA ACTCAATATC CAGCCGACAA GAGAGCGAGC ACATCTGATC
CTGCAAAAAG GCCAGGATCA CTTGATGTCC CACGTATTGT TGCGCAAATA G
|
|---|
| Protein sequence | MTSKNPIQKA LYLAFERAQW SVLRDAVPMT LSEQDLENLR GINEKVSLTE VTDIYLPLSR
LLNLIVKAKQ QRGLVLDEFL GQKPSSSPYI ISIAGSVAVG KSTTARILQA LLRHWPEHPK
VDLVTTDGFL YPLADLKRKG LLQRKGFPES YDMKMLVEFI AAVKSGQAHV NAPIYSHVTY
DRIRGQHQTV SQPDILILEG LNVLQTGLDS PVDIRRPFVS DFVDFSIYVD AEEHLLKQWY
QERFLQFRKG AFSDEKSYFH HYASLTDDEA NVIAAKIWDT INGPNLQLNI QPTRERAHLI
LQKGQDHLMS HVLLRK
|
|---|
| |