Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0174 |
Symbol | |
ID | 4250702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 194536 |
End bp | 195690 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116717 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_732312 |
Protein GI | 113968519 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACTA AGCTCATCCC CGCCCAGCAA TACCACGATA TCTTTGTCGC TGGGAAGCCA TTAATCGACT TAAGAGCACC AATCGAGTTT GACCGCGGCG CTTTTCCTTC CTCGGTAAAT CTGCCGTTAA TGGTTGATAA GGAAAGGGAA AAGGTCGGCA CTTGCTACAA AGAGCAAGGA CAGCAAGCCG CGATAGCCTT GGGCCATTCC CTCGTACATG GCGTGGTAAA ACAGCAGCGT ATTGATGCTT GGTTAAACTT TTTATCGGCC CACCCCCAAG CTTATCTTTA CTGCTTTCGC GGCGGGCTAC GCTCACAGTT AACTCAGCAA TGGCTGCAAG AAGCAGGCGT TACTGTGCCT TATGTGCAAG GCGGCTACAA AGGCATGCGC CAATATTTAA TTGGTGTAAT TGAGGCGGCG CCAAGTCTGC AACCCTTGCT AAGCCTGAGC GGTATGACGG GAAGCGGTAA AACCGATTTT TTAAAACGAC GTAAAGAAGC AATCGATCTC GAAGGCATAG CAAATCACAG AGGCTCGAGC TTTGGAAAAA ACATCGACCC ACAACCGACG CAAATTAACT TTGAAAATCG GCTCGCCATT GCCCTGTTGC ACCATCAATT AGGCAATCAC GCCTGTTTGT TGCTCGAGGA TGAAAGCTTT TTGATTGGCC GCTCGGCGCT ACCGCAAAGC TTTTATAGCG CCATGCAGAC GGCCGATATT GTGGTACTCG AAGAAGATGA TGACATCAGG CTCACTCGCT TACTCGATGA ATACGTTCAT AAAATGCACC GAGGATTTAT CGAACGCCTC GGCTTAGAGG CAGGTTTCGA AGCCTTTAGC CACTACCTAT TACAGAGTCT TGGCAGCATT CGTAAACGTC TTGGCGGTAA GCAATATCAA GAGCTGCAAG ACATCATGCA GCAAGCACTG TCTCAGCAAC TTAATCAAAA CCAAACCTCA CAACATTTGG CTTGGATAAG CCTGCTACTG CACAAGTATT ACGACCCCAT GTACGAATAC CAGTTGCAGA AAAAAGCCGG CAATATTCTG TTTAGAGGGA GTCACCAAGC CACGCATGAG TGGCTGGATA ACTATCAGCG AGATAACTAT CATCGGAATA ACGATCCGTT GAATAGCCAG CACTCAAAAG GCTAA
|
Protein sequence | MTTKLIPAQQ YHDIFVAGKP LIDLRAPIEF DRGAFPSSVN LPLMVDKERE KVGTCYKEQG QQAAIALGHS LVHGVVKQQR IDAWLNFLSA HPQAYLYCFR GGLRSQLTQQ WLQEAGVTVP YVQGGYKGMR QYLIGVIEAA PSLQPLLSLS GMTGSGKTDF LKRRKEAIDL EGIANHRGSS FGKNIDPQPT QINFENRLAI ALLHHQLGNH ACLLLEDESF LIGRSALPQS FYSAMQTADI VVLEEDDDIR LTRLLDEYVH KMHRGFIERL GLEAGFEAFS HYLLQSLGSI RKRLGGKQYQ ELQDIMQQAL SQQLNQNQTS QHLAWISLLL HKYYDPMYEY QLQKKAGNIL FRGSHQATHE WLDNYQRDNY HRNNDPLNSQ HSKG
|
| |