Gene Shewmr4_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0172 
Symbol 
ID4250700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp192017 
End bp192628 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID638116715 
ProductTetR family transcriptional regulator 
Protein accessionYP_732310 
Protein GI113968517 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAGAC GCAAAGAACA TAGTCATGAT GAGATTCGTG CTATGGCAGT AGAGGCGGCA 
ATGGCATTGC TGCAACAGCA AGGGACACAA GAACTGAGTT TACGCAAGAT TGCTAGCCAG
ATTGGCTATG TGCCGAGTAC CTTAATCAAT ATCTTTGGTA GTTATAACTA CCTACTGTTA
GCCGTTTCTG AGGCAACGTT GCAGGCGCTG ATGCACCAGC TCTCCGAGGT AAATGCTGAG
AATAGTCGCA ATCAAATCAT TAGCATGGCG CAAAAATACG CTGAGTTTGC CCATGCACAG
CGCCAATGTT TTAAGTTGGT ATTTGAACTG CAGTTACTCG ACAGTGAACC TTTGCCCGAA
TCCCAAGGCC AACTTATCGC AGGCTTATTC AGTTTAATTG AACGTGAGTT AGCCTTGTTG
TTCCCCAATA AGACGGCTGC ACAGCAACTC CAAATGAGCC GAGTACTCTG GGGCGGCATC
CACGGCCTCA CCGCCTTATC ACTGGATAAT AAATTGTTTG CCGATACGGC ATCTTTACCC
GCTTTGTTAG AAAGTCATGT GACAGGATAT TTACAGGGAA TGGGTTATCA GAGGGAAGCA
TCATGCTGCT AA
 
Protein sequence
MARRKEHSHD EIRAMAVEAA MALLQQQGTQ ELSLRKIASQ IGYVPSTLIN IFGSYNYLLL 
AVSEATLQAL MHQLSEVNAE NSRNQIISMA QKYAEFAHAQ RQCFKLVFEL QLLDSEPLPE
SQGQLIAGLF SLIERELALL FPNKTAAQQL QMSRVLWGGI HGLTALSLDN KLFADTASLP
ALLESHVTGY LQGMGYQREA SCC