| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0167 |
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| Symbol | |
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| ID | 4250695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 188313 |
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| End bp | 188975 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116710 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_732305 |
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| Protein GI | 113968512 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGACT GGAAGAAGAT TGATACAGTA CTGCTCGATA TGGATGGCAC CCTGCTCGAC
CTGCACTTTG ATAACCATTT TTGGTTGAGT CTGGTGCCGC AGGAGCTGAG CAAGCAACGG
GGATTAAGCC AGTGCCAGGC ACAACAACTG GTAGAACAAG CCTACGGCAG AGTCGCGGGC
ACGTTAGATT GGTATTGCCT CGATTATTGG CAATCCGAGC TGCAGCTCGA CATTATGGGG
CTTCACCGTA ACTTAGTTGA CCGTATTCAG CTGCGCCAAG ACAGTATGCC TTTTCTCGAT
GCCCTCGCCG CCGCAGGGAA AAAACGTATC TTAGTCACCA ATGCCCACCC TAAGAGTCTT
GCGCTTAAGC TGGAGCACAC TGAACTGGCT AGCGGCTTAG ATGCGATGAT TTCAAGCCAT
GAAACGGGTT ATCCCAAGGA ACACCCACAA TTTTGGCAAA CGCTATTTGA AAAATTCGCC
CTAGTGCCAG AGCGCTGCCT GTTTATCGAT GATAGCGAGC CTATTTTAAA TGCGGCGCGC
TTAGCGGGCG TGGGGCATCA GCTGGGGATC AGCAATCCCG ATAGCCAAAA ACCGGCTAAA
ACCTTCAATG ATTTTCCTGC TATTAGCGAC TATCGTCTGC TGTTTGCCGA TCTGGCGGGT
TAA
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| Protein sequence | MFDWKKIDTV LLDMDGTLLD LHFDNHFWLS LVPQELSKQR GLSQCQAQQL VEQAYGRVAG
TLDWYCLDYW QSELQLDIMG LHRNLVDRIQ LRQDSMPFLD ALAAAGKKRI LVTNAHPKSL
ALKLEHTELA SGLDAMISSH ETGYPKEHPQ FWQTLFEKFA LVPERCLFID DSEPILNAAR
LAGVGHQLGI SNPDSQKPAK TFNDFPAISD YRLLFADLAG
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