Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0165 |
Symbol | |
ID | 4250693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 186996 |
End bp | 187472 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116708 |
Product | general secretion pathway M protein |
Protein accession | YP_732303 |
Protein GI | 113968510 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3149] Type II secretory pathway, component PulM |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAATT TGCGGACTTG GTGGCAAGGG CTTGCATCGC GCGAGCAGCA AATCGTCGGC TTCGGCGCCG TTTTCTTAGT GATCGGCGTG TTTTACTGGG GCATCTGGAC ACCCATTGCC AATGCCGAAG CCAATGCTCT GCGCAACCTA ACGGCGCAGC AGCAGACACT GACCTATGTA AAGCAAACGG CGAATAAAAT CGCTGGCTTA AAACAAAGCG GCGCTAAACC GACAATGTCA GGCAGCTTAA GCTCGGTCGT TAACCAAACA GCGGGTACTT ACGGATTAGT GATCACTCGT ATGCAGCCTC AGGGCGATAA AATCCAAGTG TGGATGGATG ATGTGCCATT CGATGCCTTA CTCAATTATT TGAGTGACTT AGTGCAGAAA AAAGGCCTAT CACTTGAGAG TGTTGATTTG GCAGAGGCCG ACGCGGCTGG CTATGTCAAA GTAAGACGTA TCCAACTAGC GCAATAG
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Protein sequence | MDNLRTWWQG LASREQQIVG FGAVFLVIGV FYWGIWTPIA NAEANALRNL TAQQQTLTYV KQTANKIAGL KQSGAKPTMS GSLSSVVNQT AGTYGLVITR MQPQGDKIQV WMDDVPFDAL LNYLSDLVQK KGLSLESVDL AEADAAGYVK VRRIQLAQ
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