| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0164 |
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| Symbol | |
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| ID | 4250692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 185807 |
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| End bp | 186994 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116707 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_732302 |
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| Protein GI | 113968509 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAAC GGCTATTTAT TCGCTTAGGC AGAACCGCAG AGCAGGCATG CTCTTGGCTG
GTTTGGTCCG AACAAGAACA AGAAATTATC GCCTCTGGTG AACTTGCCAA CGCCCAAGGT
TTATCAACCT TAACCGAGCG CGCGGGAAAT CGGCCTATCG ATGTATTGGT GCCAGCCTCC
GCCATGACGC TCACCAGCGT GAATCTGCCC GAAAAGGGCC AACGCCAGGC CTTAAAAGCC
CTGCCTTTTA TGCTGGAAGA AACCATCGCC GATGATGTGG ATGCGATGCA CTTTACCGTT
GGCCCACGCA ATGGCGATGC CCTCAGCGTG GTAGCCGTTG CCCATGAGCA AATGCAAACT
TGGCTTAGCT GCTTGGCTGA AGCGGGTTTA AAAGTGAAGC GTATCGTGCC CGATTGCCTC
GCCTTGCCAT TGCAGGAATG CCAATGGGCG GCAATGCGTT TCGGTAACGA GTTATTACTG
CGTACAGGAT TAGGAACCGG CCATAGCCTG CCTTTACCTT GGCTGCCAGT TGCGATGAAG
CAACTGACGG CACAGGCCGA CGAAGTGTCG GTCGCCAGTT ACACTGAGAT GGAGCTGGAC
GGCGTTGAGC TTAAGCCACA GCCGCTCGAT TTACCTATGT TAGTACTGGC GCGTGGCATC
TTACATGCGC CCATCAACTT ACTCACGGGT GTGTATACGC CGAAGCGCGA ATACAGTAAG
CATCTGTTGC AATGGAAAAA TGCCGCAATC GTGTTAGGTG TTGCCATTGT CTTGTCCCTA
GTGAATAAGG GCTTAACTAT TCATCAAGTG AATGGCCAGA TTGCCGATCT GAAGGCGCAG
AGTGAAGCCA TTTATCAACA AGTGGTGCCG GGGAATTCAC GCATTGTGAA TCTACGTTCG
CAGATGGAAA GCCAACTGCG CGCACTCCAA GGCCAAGGCA GTGGTGCTGA GTTTTTTGCG
ATGCTCGATG GTTTACAGGA CGCCTTTAAA CAAGTGCCCG AGCTGAAACC AAACACCCTA
AGATTTGAGA GCGCCCGTAA TGAAATCCGT ATGCAAGTCA CGGCCAAGAA TTACGCGCAA
ATTGAGAAGT TTAAAGAGAT TGTCGGCCGT CGCTTCCAAA TGGATGGCGG TACGATGAAC
AGCGGTGAAG ATCAGGTCAC CAGTACCTTA ACCTTGAGGA GCAAATAA
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| Protein sequence | MSERLFIRLG RTAEQACSWL VWSEQEQEII ASGELANAQG LSTLTERAGN RPIDVLVPAS
AMTLTSVNLP EKGQRQALKA LPFMLEETIA DDVDAMHFTV GPRNGDALSV VAVAHEQMQT
WLSCLAEAGL KVKRIVPDCL ALPLQECQWA AMRFGNELLL RTGLGTGHSL PLPWLPVAMK
QLTAQADEVS VASYTEMELD GVELKPQPLD LPMLVLARGI LHAPINLLTG VYTPKREYSK
HLLQWKNAAI VLGVAIVLSL VNKGLTIHQV NGQIADLKAQ SEAIYQQVVP GNSRIVNLRS
QMESQLRALQ GQGSGAEFFA MLDGLQDAFK QVPELKPNTL RFESARNEIR MQVTAKNYAQ
IEKFKEIVGR RFQMDGGTMN SGEDQVTSTL TLRSK
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