Gene Shewmr4_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0163 
Symbol 
ID4250691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp184760 
End bp185758 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content49% 
IMG OID638116706 
Productgeneral secretion pathway protein K 
Protein accessionYP_732301 
Protein GI113968508 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAGC GAAGTCCGAC TAAACAACGT GGCGTCGCGC TGATTGTGGT GTTGCTGATC 
GTGGCCATGG TGGTGATTAT CGCCACCAAT ATTACCAGCC GTAATCAGTT GTCGATGCGC
CGCACCTTAA ACTTAGCCCA GTACGATCAG GCCTATTGGT ACGCGATTTC CGCCGAAGAG
CTGGCTAAGA AAATCCTTAA GCAGGACTTA GACGATTCGG AAGGCCGGGT ACACAAGCAA
CAATATTGGG CCATGAGCGA CGTGGTATTT CCGGCGGAAT ATGGTGAGAT TGCAGGCAAG
ATCACCGATA TGCGTTCGTG TTTTAACTTA AATGCTTTGT CCGTCACCAC AAAAGATGTG
GAAAACGGTC AACCTAAATT GCCGTTAGCG GCAAAGCAAT ACAAAGCGTT ATTAGTGAGT
TTAGGGATGG ATGATTTTAC CGCGGATCAT CTGACCCAAA CCTTAAAGGA TTATATCGAC
GAGGACACGG TCGCTAGCCC ATATGGCGCC GAAGATGCCG AGTACGAGGC GCGAAATGTG
CCTTATCGCG CCGCAAATAC CCTGATGAAT CACAGGAGTG AGTTGCGGGC GGTGATAGGT
TACACCCAAG ATATTTATCT GAAATTATTG CCTTATATTT GCGTCATTCC AGGGAATGAC
AGGCAACTGT TAAACGTGAA CACCATAGAG GTTGAGCAAG CGGCGCTGCT GGCGGCCATG
CTGGATAATC AGATTTCGGT TGGCGAGGCC GAAAGCATTA TCAACCAACG TCCCGGTGAT
GGTTTTGCCA AGATCGATGA TTTTTATGAA TCCTCCTCAA TGGGGTCGAT TAAGTGGGAA
GATGCGATGA AGTCCAGTTT TGTGGTGGAC AGTCAGTACT TCCTCCTCGC CTCGGGCGCT
AAGGTCGACA ACGCCATTTT TAGAATGGAG AGCGTGCTCA AAAAGAGCAG CGGTAACAAA
ATGGATGTGC TCACCCGTCA GTTTGGTGGA CAAAAATAA
 
Protein sequence
MIKRSPTKQR GVALIVVLLI VAMVVIIATN ITSRNQLSMR RTLNLAQYDQ AYWYAISAEE 
LAKKILKQDL DDSEGRVHKQ QYWAMSDVVF PAEYGEIAGK ITDMRSCFNL NALSVTTKDV
ENGQPKLPLA AKQYKALLVS LGMDDFTADH LTQTLKDYID EDTVASPYGA EDAEYEARNV
PYRAANTLMN HRSELRAVIG YTQDIYLKLL PYICVIPGND RQLLNVNTIE VEQAALLAAM
LDNQISVGEA ESIINQRPGD GFAKIDDFYE SSSMGSIKWE DAMKSSFVVD SQYFLLASGA
KVDNAIFRME SVLKKSSGNK MDVLTRQFGG QK