Gene Shewmr4_0160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0160 
Symbol 
ID4250688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp183154 
End bp183666 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content50% 
IMG OID638116703 
Productgeneral secretion pathway protein H 
Protein accessionYP_732298 
Protein GI113968505 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.90437 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTCA CCGCGGCGGC GGTGACCATG TCTATTGGCA ATTCTGGCCC ACAACAGGCG 
CTTGAGAAAA CCGCGCAGCA ATTTATCGCC GCCACTGAGT TAGTGCTGGA TGAAACCGTA
TTGAGCGGCC AATTTATCGG TATCGTGGTG GAAAAAACCA GCTATCAGTT TGTTTATTAT
AAAGATGGTA AATGGAATCC ATTGGAGAAG GACAGGATCC TGTCTGAAAA ACAAATGGAA
CCCGGAGTGG TGATAAATTT AGTGCTCGAC GGCTTGCCAC TCGTACAAGA GGATGAGCAG
GATGAATCCT GGTTCGACGA GCCTTTAATC GAGCCTTCTG CGGAAGATAA GAAAAAGCAC
CCAGAGCCGC AGATTTTGCT GTTTCCGAGT GGTGAAATGA GCGCCTTTGA GCTGAGCTTT
ATGACCAAGT CAGACAAGGG GCCACTCGAT GTGTTAGTGG TGGGCGATGC CCTTGGCCGT
TTAACCCTAG GGCGACCCGA TGAAATACGC TAA
 
Protein sequence
MGLTAAAVTM SIGNSGPQQA LEKTAQQFIA ATELVLDETV LSGQFIGIVV EKTSYQFVYY 
KDGKWNPLEK DRILSEKQME PGVVINLVLD GLPLVQEDEQ DESWFDEPLI EPSAEDKKKH
PEPQILLFPS GEMSAFELSF MTKSDKGPLD VLVVGDALGR LTLGRPDEIR