Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0160 |
Symbol | |
ID | 4250688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 183154 |
End bp | 183666 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116703 |
Product | general secretion pathway protein H |
Protein accession | YP_732298 |
Protein GI | 113968505 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.90437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACTCA CCGCGGCGGC GGTGACCATG TCTATTGGCA ATTCTGGCCC ACAACAGGCG CTTGAGAAAA CCGCGCAGCA ATTTATCGCC GCCACTGAGT TAGTGCTGGA TGAAACCGTA TTGAGCGGCC AATTTATCGG TATCGTGGTG GAAAAAACCA GCTATCAGTT TGTTTATTAT AAAGATGGTA AATGGAATCC ATTGGAGAAG GACAGGATCC TGTCTGAAAA ACAAATGGAA CCCGGAGTGG TGATAAATTT AGTGCTCGAC GGCTTGCCAC TCGTACAAGA GGATGAGCAG GATGAATCCT GGTTCGACGA GCCTTTAATC GAGCCTTCTG CGGAAGATAA GAAAAAGCAC CCAGAGCCGC AGATTTTGCT GTTTCCGAGT GGTGAAATGA GCGCCTTTGA GCTGAGCTTT ATGACCAAGT CAGACAAGGG GCCACTCGAT GTGTTAGTGG TGGGCGATGC CCTTGGCCGT TTAACCCTAG GGCGACCCGA TGAAATACGC TAA
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Protein sequence | MGLTAAAVTM SIGNSGPQQA LEKTAQQFIA ATELVLDETV LSGQFIGIVV EKTSYQFVYY KDGKWNPLEK DRILSEKQME PGVVINLVLD GLPLVQEDEQ DESWFDEPLI EPSAEDKKKH PEPQILLFPS GEMSAFELSF MTKSDKGPLD VLVVGDALGR LTLGRPDEIR
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