| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0136 |
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| Symbol | |
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| ID | 4250629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 153435 |
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| End bp | 155570 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116679 |
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| Product | oligopeptidase B |
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| Protein accession | YP_732274 |
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| Protein GI | 113968481 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0268176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACTC TGCTGCTTAC TTTAGGTCTC GCTATGCTAT TACCCGGTTG CTCCACTCCA
AAAGGGCAAG TCTCTGCGCC CGTTGCGGAA AAAATTCCCC ATGTGATGAC CTTGCACGGG
GTCACGCGCA CCGACGATTA CTACTGGATG CGCGACGATA AACGCCAAGA TCCTAAGGTC
TTGGCGCATC TGAATGCCGA AAATCGTTAC ACCCAAGCCT ACTTTAAGCC GCTTAAGTCA
TTACAGGATG GGTTGTTTAA CGAACTGACT GGGCGCTTAG TGGCCGACGA GTCGAGCGTG
CCTTACCAAT GGCACCAGCA CAGCTATTAC CGCCGCTACC AAGAGGGCGG CGAATATCCG
CTGATCGCCC GCAAAGGCAG TGACGGGATT GAGCAAATGA TGCTGGACGT GAATGAGCGC
GCTAAGGGCC ATGAGTTTTA TGGTTTAGGT GGCGTCAGCG TCAGCCCGGA TGAAACCATG
TTGGCCTTCG GTGAGGATGT CTTAAGCCGC CGCGTGTATA ACATCTACTT TAAAGATATT
GAGTCCGGCG CCATGATCAC CGATGTGCTT GAAAACACAG AGGGACGCAT CGTTTGGGGC
AATGACAATC GCCATGTGTT TTATATCGCC AAAGATCTGC AAACCCTGCT GGGTTACCGC
GTGTATCGCC ACGAACTCGG CACGCCACAA TCGCGCGATG TGTTGGTGTA TGAGGAGCAA
GACGATGCTT ACTACATCTC CCTCGGCAAG AGTTTAGACG AGTCGCAAAT TGTGCTGTTC
CACGAGAGCA CCACAACCAG CGAAGTGTCT GTGCTGGATG CTAACGATCC CCTAAGCCTG
TTCAAACCTG TGCTGGCGCG GGAAGAAGGC CATGAATACA GCGTCTCGAA ACTGGGCGAC
AGCTATTACA TTCTCACCAA CTGGCAGGCG ACTAACTTCC GTTTGATGAA AGTGGCGATT
AAGGATGCCG CCGATAAGTC CAAATGGCAG GAAGTGGTTG CCCATAATCC CAATGCGCGC
ATCGAAGACG AGCTGGTGCT AAAGGATTAC CTGATTATTC AAACCCGTGA AAATGGTCTG
ACACGCATTA AAGTGATGCC ATTCAATGGT CAAAAGCCCT TTGAGCTGAG TTTTGACGAG
CCCGCCTATG TGCTCGGTTT AGATGTTAAC GCCCAGCAAG ATAGCGATAA GTTACGGATT
TTCTACTCGA GCCTGACTAC GCCCGAGGCG ATTTATGAGT ACCACTTAAG CAATCCCGAT
AGACGCGATC TGCTTAAGCA GGAGCAAGTG CTCGGCGGCT TCGATGCCAG CCAATACCGC
GCCGAACGTT TATTTGTCAC CGCCCGCGAT GGCGCTAAGG TGCCAGTGTC CTTGGTGTAT
CGTAAGGATA AGTTCAACAA AGACGGCACC AACCCTCTGT ACCAATATGG TTATGGTTCA
TATGGTTACA CAGTAGAGCC TGACTTTTCG TCGTCGGTTA TCAGTTTGCT CGACCGCGGC
TTTGTATATG CCATCGCCCA TGTGCGCGGC AGCGAAATGT TAGGTCGCCC TTGGTACGAT
GCGGGTAAGT TGCTGAATAA AAAGAATACC TTTAATGACT TTATCGATGT CACCACCGCC
TTAACCGAGC AAGGTTATGG CGATAAAAAT AAAGTGGTGG CCTCGGGCGG CAGTGCTGGC
GGGCTGTTAA TGGGCGCGAT TGCCAATATG GCGCCTGAAA AGTACTTTGC CATTGCAGCA
CATGTGCCCT TTGTGGATGT GGTCACGACC ATGCTCGATG AGTCAATTCC GCTCACCACC
AACGAGTACG ATGAATGGGG TAATCCAAAC GAGAAAACCT ATTTCGACTA TATGCTCAGC
TACTCGCCCT ACGACAATGT TGCCGACCAT GAGTACCCAC ACCTGTTGGT CACCACAGGT
TTGCATGATT CGCAGGTGCA GTATTTCGAG CCAGCTAAAT GGGTAGCAAA ACTGCGTGAA
GTGCAAAATA AATGGTACAA ACTGGACGAT AAGGTGTTGT TATTCGACGT TAATATGGAT
GCTGGACACG GTGGTAAGAG TGGCCGTTAC CGCCAGTATC AAGACACAGC GCAGGAATAT
GCCTTCTTCT TAAGCCTGCT CGGCATGACT AAGTAG
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| Protein sequence | MRTLLLTLGL AMLLPGCSTP KGQVSAPVAE KIPHVMTLHG VTRTDDYYWM RDDKRQDPKV
LAHLNAENRY TQAYFKPLKS LQDGLFNELT GRLVADESSV PYQWHQHSYY RRYQEGGEYP
LIARKGSDGI EQMMLDVNER AKGHEFYGLG GVSVSPDETM LAFGEDVLSR RVYNIYFKDI
ESGAMITDVL ENTEGRIVWG NDNRHVFYIA KDLQTLLGYR VYRHELGTPQ SRDVLVYEEQ
DDAYYISLGK SLDESQIVLF HESTTTSEVS VLDANDPLSL FKPVLAREEG HEYSVSKLGD
SYYILTNWQA TNFRLMKVAI KDAADKSKWQ EVVAHNPNAR IEDELVLKDY LIIQTRENGL
TRIKVMPFNG QKPFELSFDE PAYVLGLDVN AQQDSDKLRI FYSSLTTPEA IYEYHLSNPD
RRDLLKQEQV LGGFDASQYR AERLFVTARD GAKVPVSLVY RKDKFNKDGT NPLYQYGYGS
YGYTVEPDFS SSVISLLDRG FVYAIAHVRG SEMLGRPWYD AGKLLNKKNT FNDFIDVTTA
LTEQGYGDKN KVVASGGSAG GLLMGAIANM APEKYFAIAA HVPFVDVVTT MLDESIPLTT
NEYDEWGNPN EKTYFDYMLS YSPYDNVADH EYPHLLVTTG LHDSQVQYFE PAKWVAKLRE
VQNKWYKLDD KVLLFDVNMD AGHGGKSGRY RQYQDTAQEY AFFLSLLGMT K
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