Gene Shewmr4_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0133 
Symbol 
ID4250626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp147885 
End bp148421 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content46% 
IMG OID638116676 
ProductFerritin, Dps family protein 
Protein accessionYP_732271 
Protein GI113968478 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1528] Ferritin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00416166 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGTCTG CAACCATGAT CGAAAAGTTG AATGAACAAA TTAATATGGA GTTCTTCTCC 
TCTAATTTAT ACCTGCAAAT GAGTGCATGG TGTGAAGATC AAGGCTTTGA AGGCGCAGCA
AAATTTATGC GCGAACATGC GGATGAAGAG ATGGGCCATA TGCGTCGTTT GTTCACTTAT
GTGAGCGAAA CCGGCGGCTT ACCGCTACTG GGTGCAATTG AAGCGCCGCA GTCGCAGTTT
GACTCTCTGC TGGCGTTATT CGAGCTGACC TATGAGCACG AGCAGCTGAT CACCAGTAAG
ATCAATGCCT TGGCCCATGC GGCCTTTTCA AACCAAGATT ATTCGACCTT CAACTTCCTG
CAATGGTATG TGGCCGAGCA GCACGAAGAA GAAAAACTGT TTAAGTCGAT TGTCGATAAG
ATCCGTTTAG TGGGCGAAGA TGGTAAAGCA CTGTTCTTTA TCGATAAAGA TTTAGCTAAG
TTGGCATCAA AGGGCGGTGA GAGCATTATG AACCCCCAAA GCCAGCCACA GGCTTAA
 
Protein sequence
MLSATMIEKL NEQINMEFFS SNLYLQMSAW CEDQGFEGAA KFMREHADEE MGHMRRLFTY 
VSETGGLPLL GAIEAPQSQF DSLLALFELT YEHEQLITSK INALAHAAFS NQDYSTFNFL
QWYVAEQHEE EKLFKSIVDK IRLVGEDGKA LFFIDKDLAK LASKGGESIM NPQSQPQA