Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0128 |
Symbol | |
ID | 4250621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 143371 |
End bp | 144465 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638116671 |
Product | putative SAM-dependent methyltransferase |
Protein accession | YP_732266 |
Protein GI | 113968473 |
COG category | [R] General function prediction only |
COG ID | [COG3129] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000438589 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTAAAC CCGCCATTAA AACTGCCGCT AAACCCGCGA CGTCATCCGC AGGAAAACGA GGTAAGCCAA TCACGCCAAA ATCGGTAGCC AAACCCCAAG CTGCGAAACC GAAAACGGTC AGCAAGCCCA AAGTAAAGCC CGGCGAGAAG AAGCGCTTAC ATCCACGTAA TTTGCATATT AATGGCTATG ACTTTCCGGT ACTGATGGTG AGTTATCCCA AGCTAAAAGC CTTTGTTCGG CCCACGCCCT ATGGCGACTT GTCTATCGAT TTTGCCGATC CCTCGGCGGT AAAAACTCTT AATGCGGCTC TCTTGCAACA TCATTATGGG CTGGCATTTT GGGATATTCC CAAGGGCGCG CTGTGCCCAC CAATCCCTGG ACGGGTCGAT TATCTGCACT ACTTGGCCGA TCTGTTATTT GAGGGCGGCA AAGTTAAGCG CGCTGCGGCA ATCCGTGCCT TAGATATAGG CACTGGGGCG AATGGTGTTT ACGCCATCTT AGGGCATCAA GTGTATGACT GGCAGTTTGT CGCCTCGGAT ATTAATCCTC AGTCGCTTAC CAATGTGCAG CGGATTATCG ACAATAACCC GAGTTTGCAG GGGCACTTAT CCTTAAGGCG GCAGCAGGAT GACAAGGCGG TCTTTAAGGG GATTATTCAA GCTTCTGATC GCTTCGAGCT AACCCTGTGC AATCCTCCCT TTCATGGCTC GTTAAAAGAA GCGAGTCAAG GCTCGCTGCG TAAGGTGCGT AATCTGCAAC TTAATCGGGG TGAGCAGCCT AAAGCGACCA GCGCGACCTT AAACTTTGGC GGTCAGGCGG CGGAGTTATG GTGCCAAGGG GGGGAAAAGC AATTTTTAGC AACTATGATC CGCGAGAGCC AAGCGTTTGC CGAGCAGTGT TTGTGGTTTA CCAGCTTAGT GTCGAAGCAG GAGAATCTAA AGCCCTGTTA TCAGGCTTTG GAAAAGTTAG GTGTCGATAC CGTTAAAACC ATCGAGATGC AGCAGGGCAA TAAGATCACT CGGTTACTCG CATGGAGTTT CCATTCGCAG GCTAAACGTT TGCAGTGGCG AAATCAGATA GTTAGCGGGA CATAA
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Protein sequence | MPKPAIKTAA KPATSSAGKR GKPITPKSVA KPQAAKPKTV SKPKVKPGEK KRLHPRNLHI NGYDFPVLMV SYPKLKAFVR PTPYGDLSID FADPSAVKTL NAALLQHHYG LAFWDIPKGA LCPPIPGRVD YLHYLADLLF EGGKVKRAAA IRALDIGTGA NGVYAILGHQ VYDWQFVASD INPQSLTNVQ RIIDNNPSLQ GHLSLRRQQD DKAVFKGIIQ ASDRFELTLC NPPFHGSLKE ASQGSLRKVR NLQLNRGEQP KATSATLNFG GQAAELWCQG GEKQFLATMI RESQAFAEQC LWFTSLVSKQ ENLKPCYQAL EKLGVDTVKT IEMQQGNKIT RLLAWSFHSQ AKRLQWRNQI VSGT
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