Gene Shewmr4_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0128 
Symbol 
ID4250621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp143371 
End bp144465 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content51% 
IMG OID638116671 
Productputative SAM-dependent methyltransferase 
Protein accessionYP_732266 
Protein GI113968473 
COG category[R] General function prediction only 
COG ID[COG3129] Predicted SAM-dependent methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000438589 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTAAAC CCGCCATTAA AACTGCCGCT AAACCCGCGA CGTCATCCGC AGGAAAACGA 
GGTAAGCCAA TCACGCCAAA ATCGGTAGCC AAACCCCAAG CTGCGAAACC GAAAACGGTC
AGCAAGCCCA AAGTAAAGCC CGGCGAGAAG AAGCGCTTAC ATCCACGTAA TTTGCATATT
AATGGCTATG ACTTTCCGGT ACTGATGGTG AGTTATCCCA AGCTAAAAGC CTTTGTTCGG
CCCACGCCCT ATGGCGACTT GTCTATCGAT TTTGCCGATC CCTCGGCGGT AAAAACTCTT
AATGCGGCTC TCTTGCAACA TCATTATGGG CTGGCATTTT GGGATATTCC CAAGGGCGCG
CTGTGCCCAC CAATCCCTGG ACGGGTCGAT TATCTGCACT ACTTGGCCGA TCTGTTATTT
GAGGGCGGCA AAGTTAAGCG CGCTGCGGCA ATCCGTGCCT TAGATATAGG CACTGGGGCG
AATGGTGTTT ACGCCATCTT AGGGCATCAA GTGTATGACT GGCAGTTTGT CGCCTCGGAT
ATTAATCCTC AGTCGCTTAC CAATGTGCAG CGGATTATCG ACAATAACCC GAGTTTGCAG
GGGCACTTAT CCTTAAGGCG GCAGCAGGAT GACAAGGCGG TCTTTAAGGG GATTATTCAA
GCTTCTGATC GCTTCGAGCT AACCCTGTGC AATCCTCCCT TTCATGGCTC GTTAAAAGAA
GCGAGTCAAG GCTCGCTGCG TAAGGTGCGT AATCTGCAAC TTAATCGGGG TGAGCAGCCT
AAAGCGACCA GCGCGACCTT AAACTTTGGC GGTCAGGCGG CGGAGTTATG GTGCCAAGGG
GGGGAAAAGC AATTTTTAGC AACTATGATC CGCGAGAGCC AAGCGTTTGC CGAGCAGTGT
TTGTGGTTTA CCAGCTTAGT GTCGAAGCAG GAGAATCTAA AGCCCTGTTA TCAGGCTTTG
GAAAAGTTAG GTGTCGATAC CGTTAAAACC ATCGAGATGC AGCAGGGCAA TAAGATCACT
CGGTTACTCG CATGGAGTTT CCATTCGCAG GCTAAACGTT TGCAGTGGCG AAATCAGATA
GTTAGCGGGA CATAA
 
Protein sequence
MPKPAIKTAA KPATSSAGKR GKPITPKSVA KPQAAKPKTV SKPKVKPGEK KRLHPRNLHI 
NGYDFPVLMV SYPKLKAFVR PTPYGDLSID FADPSAVKTL NAALLQHHYG LAFWDIPKGA
LCPPIPGRVD YLHYLADLLF EGGKVKRAAA IRALDIGTGA NGVYAILGHQ VYDWQFVASD
INPQSLTNVQ RIIDNNPSLQ GHLSLRRQQD DKAVFKGIIQ ASDRFELTLC NPPFHGSLKE
ASQGSLRKVR NLQLNRGEQP KATSATLNFG GQAAELWCQG GEKQFLATMI RESQAFAEQC
LWFTSLVSKQ ENLKPCYQAL EKLGVDTVKT IEMQQGNKIT RLLAWSFHSQ AKRLQWRNQI
VSGT