Gene Shewmr4_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0121 
Symbol 
ID4251000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp132469 
End bp133269 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content52% 
IMG OID638116664 
Producthypothetical protein 
Protein accessionYP_732259 
Protein GI113968466 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0375691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATAC TCTTTGTCGC CCTTAATACC CATCCTCAGT ATCCGCTGAT CATTTGCGCC 
AATCGGGATG AGTTTCACCA TAGGCCCACA GCTCCAGCAC AATTTTGGCC ACCGGAACAG
AATATGCTCG CGGGCAAAGA TTTGCAGGCG GGGGGCACTT GGTTTGGCGT AAATAAACAG
GGGCAAATTG CAGGAATCAC TAACTTGAGA GTGGCTCAAA AATCCCAAGA GCCAATGCGC
AGCCGCGGGG AGCTGATCAT TAAAGCCTTA AGCTCGGGTT CGCTTATCTG CCCTAACTGG
CTTGAGGAAC ACGCCGAAGA TTATCAGCCA TTTAATCTCG TTTTTGGCCA AGGGACGGAT
CTCTACTGCT TTAACAGTCT TAAGCGGAAC ACGGTAAAAC TCACCGCAGG ATTCCATGCC
ATTAGCAATG GCGCACTCGA TGATATCTGG CCGAAAATGG CTAAAGGCCA ACGCTCGCTC
GAGGCCCTTA TCCAACAAGC GGGACCACTC GAGTTAGAGT CGCTCATCCA GTTGATGCAG
GATGATTCGC GGCCACAGGA TAACGAGCTA CCCGACACTG GCGTCGGGCT AGAGTGGGAA
CGCCGACTCG CAGCGATTTA TATTCGTCAC CCCGACTATG GCACCCGTTC CACCAGCATT
TTGCTGCAAG ATGCCCAAGG GGAAATCCAG TTTACCGAGG TGAGATACGA TGGTAAGGGT
CGACGGCTGG GACAGCAGGA CTTCCACTTC ACCCTGCCGC CACAATTACC TAAAGAACCG
GACTGCCTAG CTCACTTTTA G
 
Protein sequence
MCILFVALNT HPQYPLIICA NRDEFHHRPT APAQFWPPEQ NMLAGKDLQA GGTWFGVNKQ 
GQIAGITNLR VAQKSQEPMR SRGELIIKAL SSGSLICPNW LEEHAEDYQP FNLVFGQGTD
LYCFNSLKRN TVKLTAGFHA ISNGALDDIW PKMAKGQRSL EALIQQAGPL ELESLIQLMQ
DDSRPQDNEL PDTGVGLEWE RRLAAIYIRH PDYGTRSTSI LLQDAQGEIQ FTEVRYDGKG
RRLGQQDFHF TLPPQLPKEP DCLAHF