Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0121 |
Symbol | |
ID | 4251000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 132469 |
End bp | 133269 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116664 |
Product | hypothetical protein |
Protein accession | YP_732259 |
Protein GI | 113968466 |
COG category | [S] Function unknown |
COG ID | [COG3332] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0375691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCATAC TCTTTGTCGC CCTTAATACC CATCCTCAGT ATCCGCTGAT CATTTGCGCC AATCGGGATG AGTTTCACCA TAGGCCCACA GCTCCAGCAC AATTTTGGCC ACCGGAACAG AATATGCTCG CGGGCAAAGA TTTGCAGGCG GGGGGCACTT GGTTTGGCGT AAATAAACAG GGGCAAATTG CAGGAATCAC TAACTTGAGA GTGGCTCAAA AATCCCAAGA GCCAATGCGC AGCCGCGGGG AGCTGATCAT TAAAGCCTTA AGCTCGGGTT CGCTTATCTG CCCTAACTGG CTTGAGGAAC ACGCCGAAGA TTATCAGCCA TTTAATCTCG TTTTTGGCCA AGGGACGGAT CTCTACTGCT TTAACAGTCT TAAGCGGAAC ACGGTAAAAC TCACCGCAGG ATTCCATGCC ATTAGCAATG GCGCACTCGA TGATATCTGG CCGAAAATGG CTAAAGGCCA ACGCTCGCTC GAGGCCCTTA TCCAACAAGC GGGACCACTC GAGTTAGAGT CGCTCATCCA GTTGATGCAG GATGATTCGC GGCCACAGGA TAACGAGCTA CCCGACACTG GCGTCGGGCT AGAGTGGGAA CGCCGACTCG CAGCGATTTA TATTCGTCAC CCCGACTATG GCACCCGTTC CACCAGCATT TTGCTGCAAG ATGCCCAAGG GGAAATCCAG TTTACCGAGG TGAGATACGA TGGTAAGGGT CGACGGCTGG GACAGCAGGA CTTCCACTTC ACCCTGCCGC CACAATTACC TAAAGAACCG GACTGCCTAG CTCACTTTTA G
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Protein sequence | MCILFVALNT HPQYPLIICA NRDEFHHRPT APAQFWPPEQ NMLAGKDLQA GGTWFGVNKQ GQIAGITNLR VAQKSQEPMR SRGELIIKAL SSGSLICPNW LEEHAEDYQP FNLVFGQGTD LYCFNSLKRN TVKLTAGFHA ISNGALDDIW PKMAKGQRSL EALIQQAGPL ELESLIQLMQ DDSRPQDNEL PDTGVGLEWE RRLAAIYIRH PDYGTRSTSI LLQDAQGEIQ FTEVRYDGKG RRLGQQDFHF TLPPQLPKEP DCLAHF
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