Gene Shewmr4_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0120 
Symbol 
ID4250999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp131996 
End bp132445 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID638116663 
Producthypothetical protein 
Protein accessionYP_732258 
Protein GI113968465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.100163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGAC AGGGATTGAT GAAAAAACAC ATTTTACAGT GCTTCGCGGT ACTGATGTTG 
CTGTTTGCTG GCCAAGCGAG TGCGGTGCCG ACGGATGACA TTGCCCAAAT GCTAAAAGGT
CAGGAAGATG CGTGGAACCG CGGCGATCTT GACGCTTACA TGCAGGGTTA TTGGAAGAAC
GAGCAACTCA GATTTGTCTC TAACGGTAAG TTTCGTTATG GCTGGGAGGA AACCCTTGCC
GTCTATAAGA AAAATTATCC GAATAAAGAG GCGTTGGGTG AGCTGAAGTT CACTATCAAA
GAAATCAAAA TGCTCAGCAA CTATGCCGCT ATGGTGGTTG GGCGCTGGGA TTTAAAGCGG
CAAAAGGATG CACCCTCGGG CGTTTTTACT CTGCTGGTGG AAAAAATTGA TGACCGCTGG
GTGATCACTA TGGACCACAG TTCGGACTGA
 
Protein sequence
MLRQGLMKKH ILQCFAVLML LFAGQASAVP TDDIAQMLKG QEDAWNRGDL DAYMQGYWKN 
EQLRFVSNGK FRYGWEETLA VYKKNYPNKE ALGELKFTIK EIKMLSNYAA MVVGRWDLKR
QKDAPSGVFT LLVEKIDDRW VITMDHSSD