| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0118 |
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| Symbol | |
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| ID | 4250997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 130657 |
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| End bp | 131280 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116661 |
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| Product | lysine exporter protein LysE/YggA |
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| Protein accession | YP_732256 |
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| Protein GI | 113968463 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1280] Putative threonine efflux protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.161757 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCG AGACTTGGTT ACTCTATCTT TTTGCGATTG TTTTAATTGG GATTTCCCCA
GGGCCTATCG CCATGTTGTC TATGTCCCAC GGCATTCATT TCGGCAAAAA ACGTAGCATA
GCCACAGGGC TTGGCAGTGT CAGCGCCGTG CTGGTGCTGA TGGCCGCTTC GGCGGCAGGA
TTAGGCGCCA TTATCAGCGC CTCGGAATAC GGCTTTAGCT TGCTCAAATG GTGCGGCGCC
GCCTATCTGG TGTTTTTGGG CATTAAACTC GTGCTCACCA AGTCGCAGGG GCAAAAGCTG
GAAGTGACGA AAACAGAAGG AAAAGGAACT GCTAAACAAC TCTATAAACA GGCATTTTTA
GTGGGGATCA GCAATCCTAA AGACTTACTG TTTTTTGCGG CGTTATTTCC ACAATTTATC
GATTTAACCG CCCCACAAAT GCCGCAACTG ACGATTCTTG CCCTCACTTG GGCGCTGGTC
GATTTTAGCT TTGTGATGCT GTACGCCTCT ATGGCCAATG TGCTGGCCCC GAGCCTAAAG
GCCAGCAACA AACTGCATTG GTTTGACCGT ACCAGCGGCG GCGTGTTTCT CACCCTCGCC
GCCATCTTAG TCAGTCGGGA TTAG
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| Protein sequence | MQTETWLLYL FAIVLIGISP GPIAMLSMSH GIHFGKKRSI ATGLGSVSAV LVLMAASAAG
LGAIISASEY GFSLLKWCGA AYLVFLGIKL VLTKSQGQKL EVTKTEGKGT AKQLYKQAFL
VGISNPKDLL FFAALFPQFI DLTAPQMPQL TILALTWALV DFSFVMLYAS MANVLAPSLK
ASNKLHWFDR TSGGVFLTLA AILVSRD
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