Gene Shewmr4_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0115 
Symbol 
ID4250994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp127963 
End bp128583 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID638116658 
Producthypothetical protein 
Protein accessionYP_732253 
Protein GI113968460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.651645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGTT CATTTCGCCT CAGCGCGCTC AGCTCATTAT TGTTGCTCTC TTCATCTGTG 
ATGGCGGCCG ATGTGGCGAC CATCACCCTA GAGAATGGCG CTCAAGTCAG ATTAAAAGAT
GACTTCACTT GGGAATATAT CATCACAGAG ACTAAAGTCG CCGAAGCGCC AGCGGTAGCC
ACAGTTGCAG CCGCGCCCAG CGTTGCGGCC GTAGCTTCAA CTCCAGTGGC CGTTGAAGCC
GCCAAACCTG TCACCACGCT AACGGCGAAC GCCATTGCGC GCCCAGAGCT CTTAGGCTCT
ACTGCTAAAG ATGGCATTAA AGTCACCTTC AGAGAGAGTC AATGGAAGGG CGATAAACTC
GGCCTGACCT TCGAGCTTGC CAGCACCAGC GGTGAACATG TGACCTTAGT TGAAGTGGAA
ACCAGTTTCT TTGCCGACGA TGGCACCCTG CTCAAAACCG AGAAGCTCGA CATCTGGGAA
GCGATTTTCC GCATGCCAGA AACTTACCTA CGCAAAGGTG AGCAGCGTAA GAGTCCGGTC
ATTTGGGTTG AAGGTGTCGA TAAAAGCCGT TGGCAAAAAC AACTGCTCAA CCTCAAAATC
ACCGAGATTA ATTCACGCTA A
 
Protein sequence
MPSSFRLSAL SSLLLLSSSV MAADVATITL ENGAQVRLKD DFTWEYIITE TKVAEAPAVA 
TVAAAPSVAA VASTPVAVEA AKPVTTLTAN AIARPELLGS TAKDGIKVTF RESQWKGDKL
GLTFELASTS GEHVTLVEVE TSFFADDGTL LKTEKLDIWE AIFRMPETYL RKGEQRKSPV
IWVEGVDKSR WQKQLLNLKI TEINSR