Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0109 |
Symbol | |
ID | 4250988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 123153 |
End bp | 124367 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638116652 |
Product | putative inner membrane protein |
Protein accession | YP_732247 |
Protein GI | 113968454 |
COG category | [R] General function prediction only |
COG ID | [COG2391] Predicted transporter component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATGGC AACAATTTAA ACAACAATAT TTAGTCCGTT TTTGGGCTCC TATGCCTGCG GTTATCGCCG CCGGTATCCT TTCTACTTAC TATTTTGGGT TAACTGGCAC TTTTTGGGCT GTCACGGGGG AATTTACGCG CTGGGGCGGG CACTTACTGC AACTGGTGGG TGCTAATCCT GAGACTTGGG GTTATTTCAA GGTGATAGGT TTACAGGGCT CTCCCTTAGA CCGCATCGAC GGCATGATGA TCATCGGCAT GTTTGGTGGT TGTATTGCGG CGGCGCTGTG GGCGAATAAC GTTAAGCTGC GTATGCCACA GAGCCGTATC CGCATCGCTC AGGCACTTAT CGGCGGCATT ATTGCGGGCT TTGGTGCGCG TTTGGCGATG GGCTGTAACT TAGCGGCCTT CTTCACCGGT ATTCCGCAGT TTTCCTTACA CGCATGGTTT TTTGCCCTCG CGACGGCGGC GGGCTCTTAC TTTGGCGCGC GTTTTACGCT ACTGCCCATG TTCCGCATTC CAGTGAAATT GAAGAAAGTC GATAAGGCGA CGTCGGTTAA ACAGGATGAA AACCAAGCCA GACGGCGTTT TCGCATCGGC ATGTTAGTGT TCGCGGCCAT TATTGGTTGG GGATTACTGA CCATGTTCAA CGCGCCTAAA TTGGGTATCG CCATGCTCTG TGGCGTGGGT TTCGGCCTGT TGATTGAGCG GGCGCAAATC TGCTTTACCT CGGCATTTCG CGATATGTGG ATCACCGGAC GCACCCATAT GGCCAAGGCG ATTATTCTCG GTATGGCGGT GAGTGCCATC GGGATTTATA GCTATGTGCA ATTAGGTGTG CCGCCCAAAA TCATGTGGGC TGGCCCGAAT GCGGTGATTG GTGGCCTGCT GTTTGGCTTT GGCATTGTGC TGGCAGGTGG TTGTGAGACG GGTTGGATGT ATCGCGCCGT CGAAGGCCAA GTGCATTTCT GGTGGGTTGG TTTAGGCAAC GTGCTGGGTT CAACCCTGCT GGCCTATTAC TGGGATGATT TAGCCCAGCC ATTAGCCACA AGTTGGGACA AGGTTAACCT GCTCTCTAGC TTTGGCGATA AGGGCGGTTT ATTGCTGACC TATCTGCTGC TGGCGCTGTC GTTTGCGGCC ATGTTGCTGT GGGAAAAACG TTTCTTTGCC CGTAAGGCGA AGCGGGATGA ACAACTGATC GCGGAGGCGG CGTAA
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Protein sequence | MTWQQFKQQY LVRFWAPMPA VIAAGILSTY YFGLTGTFWA VTGEFTRWGG HLLQLVGANP ETWGYFKVIG LQGSPLDRID GMMIIGMFGG CIAAALWANN VKLRMPQSRI RIAQALIGGI IAGFGARLAM GCNLAAFFTG IPQFSLHAWF FALATAAGSY FGARFTLLPM FRIPVKLKKV DKATSVKQDE NQARRRFRIG MLVFAAIIGW GLLTMFNAPK LGIAMLCGVG FGLLIERAQI CFTSAFRDMW ITGRTHMAKA IILGMAVSAI GIYSYVQLGV PPKIMWAGPN AVIGGLLFGF GIVLAGGCET GWMYRAVEGQ VHFWWVGLGN VLGSTLLAYY WDDLAQPLAT SWDKVNLLSS FGDKGGLLLT YLLLALSFAA MLLWEKRFFA RKAKRDEQLI AEAA
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