Gene Shewmr4_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0109 
Symbol 
ID4250988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp123153 
End bp124367 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content53% 
IMG OID638116652 
Productputative inner membrane protein 
Protein accessionYP_732247 
Protein GI113968454 
COG category[R] General function prediction only 
COG ID[COG2391] Predicted transporter component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGC AACAATTTAA ACAACAATAT TTAGTCCGTT TTTGGGCTCC TATGCCTGCG 
GTTATCGCCG CCGGTATCCT TTCTACTTAC TATTTTGGGT TAACTGGCAC TTTTTGGGCT
GTCACGGGGG AATTTACGCG CTGGGGCGGG CACTTACTGC AACTGGTGGG TGCTAATCCT
GAGACTTGGG GTTATTTCAA GGTGATAGGT TTACAGGGCT CTCCCTTAGA CCGCATCGAC
GGCATGATGA TCATCGGCAT GTTTGGTGGT TGTATTGCGG CGGCGCTGTG GGCGAATAAC
GTTAAGCTGC GTATGCCACA GAGCCGTATC CGCATCGCTC AGGCACTTAT CGGCGGCATT
ATTGCGGGCT TTGGTGCGCG TTTGGCGATG GGCTGTAACT TAGCGGCCTT CTTCACCGGT
ATTCCGCAGT TTTCCTTACA CGCATGGTTT TTTGCCCTCG CGACGGCGGC GGGCTCTTAC
TTTGGCGCGC GTTTTACGCT ACTGCCCATG TTCCGCATTC CAGTGAAATT GAAGAAAGTC
GATAAGGCGA CGTCGGTTAA ACAGGATGAA AACCAAGCCA GACGGCGTTT TCGCATCGGC
ATGTTAGTGT TCGCGGCCAT TATTGGTTGG GGATTACTGA CCATGTTCAA CGCGCCTAAA
TTGGGTATCG CCATGCTCTG TGGCGTGGGT TTCGGCCTGT TGATTGAGCG GGCGCAAATC
TGCTTTACCT CGGCATTTCG CGATATGTGG ATCACCGGAC GCACCCATAT GGCCAAGGCG
ATTATTCTCG GTATGGCGGT GAGTGCCATC GGGATTTATA GCTATGTGCA ATTAGGTGTG
CCGCCCAAAA TCATGTGGGC TGGCCCGAAT GCGGTGATTG GTGGCCTGCT GTTTGGCTTT
GGCATTGTGC TGGCAGGTGG TTGTGAGACG GGTTGGATGT ATCGCGCCGT CGAAGGCCAA
GTGCATTTCT GGTGGGTTGG TTTAGGCAAC GTGCTGGGTT CAACCCTGCT GGCCTATTAC
TGGGATGATT TAGCCCAGCC ATTAGCCACA AGTTGGGACA AGGTTAACCT GCTCTCTAGC
TTTGGCGATA AGGGCGGTTT ATTGCTGACC TATCTGCTGC TGGCGCTGTC GTTTGCGGCC
ATGTTGCTGT GGGAAAAACG TTTCTTTGCC CGTAAGGCGA AGCGGGATGA ACAACTGATC
GCGGAGGCGG CGTAA
 
Protein sequence
MTWQQFKQQY LVRFWAPMPA VIAAGILSTY YFGLTGTFWA VTGEFTRWGG HLLQLVGANP 
ETWGYFKVIG LQGSPLDRID GMMIIGMFGG CIAAALWANN VKLRMPQSRI RIAQALIGGI
IAGFGARLAM GCNLAAFFTG IPQFSLHAWF FALATAAGSY FGARFTLLPM FRIPVKLKKV
DKATSVKQDE NQARRRFRIG MLVFAAIIGW GLLTMFNAPK LGIAMLCGVG FGLLIERAQI
CFTSAFRDMW ITGRTHMAKA IILGMAVSAI GIYSYVQLGV PPKIMWAGPN AVIGGLLFGF
GIVLAGGCET GWMYRAVEGQ VHFWWVGLGN VLGSTLLAYY WDDLAQPLAT SWDKVNLLSS
FGDKGGLLLT YLLLALSFAA MLLWEKRFFA RKAKRDEQLI AEAA