| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0106 |
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| Symbol | |
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| ID | 4250985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 118635 |
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| End bp | 120065 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638116648 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_732244 |
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| Protein GI | 113968451 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACAAA TGATGACCCA AGTACCCGAT ACACCCCAAG CCCTGTACCG AGCGCTGCCG
TCGATGGACA GTCTGCTCGC CGATGCGATA TTGGCGCCTC TGCTGCAAAG CTATGGTAAA
GCGGCGGTAA AAGCGGCGCT GGATAGCCAG TTACGCACGG CGCGTGAGCT GATTGCCCAG
GAGCGACGTT TACCCGCTTG GTGTGCTAAC CCGTCATTAT TGAACGGATA TTTGGTTGAT
CAATTGTCTA AGGACTATAG CCATAGTCTA AAACCCGTGT GGAACCTCAC GGGAACTATC
CTGCATACCA ATCTTGGTCG CGCCCAGCAG TCTGAGGCGG CCATTCGGGC GGTGACCTCT
GTGATGCGTT ATCCGACGCC GCTGGAATTT GAGTTGGCAG CGGGTGAGCG CGGCCATCGG
GATAATGCTA TTAGTGGGTT AATCCAACGC TTAACAGGGG CAGAGGCCTG CTGCGTGGTG
AATAACAACG CCGCCGCTGT GTTGCTGATG TTGTCGGCGG TGGCCGCGGG TAAAGAAGTG
ATCGTCTCCC GCGGCGAGCT GGTGGAAATC GGCGGTGCCT TTCGCATTCC TGACATTATG
CGCCAAGCGG GTTGTACCTT AGTGGAAGTC GGCAGCACTA ATCGTACTCA CCTCAAGGAC
TATGAGCAGG CGATCACCGA AAATACCGCC GCCATTATGA AGGTGCACAC CAGCAACTAC
CATATCAGTG GCTTTACCGC TTCGGTGGAT GAGGCCAGAT TAGGCCAACT CTGCCGCGAG
CGTGGGGTCG CGCTGATCTC GGATCTTGGC AGTGGTTCAC TCACCGACTT ACGCCGTTTT
GGCCTTAAAC AAGAGCCGAC GCCCCAAGCC ATGTTGGCGG ATGGGGTCGA TCTGGTCAGC
TTCTCCGGCG ATAAACTCCT CGGCGGCCCG CAATCGGGTT TGATTGTCGG CAAACAGGCG
CTAATTAATA AGCTTCAAAG CCATCCGCTC AAGCGTGCAT TGCGTTGCGA CAAGCTGATT
CTCGCGGCGC TTGAGGCGAC GCTGATCCAC TATCTCAACC CAGAATCCTT GGATCGGGAA
CTGCCGATTA TGGCCAAATT TGCCCGCAGT CAAGCAGAGT TACGCCAAAT TGGTGAGCGC
CTGCAGCGCG CCTTAGCGCC ACTGTTTGCC CCGAGTTATG GCATCGAGCT AGTGGAGTGC
CAAACTCAAG TCGGTAGCGG CTCGCAGCCC GATACCTTTT TGCCCTCAAT CGCCCTGTGC
TTTAACGCGC AAGAGGGTGG CAGTCTAACG CTGCTCGAGC AGCATTTTAA GCAGGCGCAG
CGGCCTGTGA TTGGCCGTAT GACCCAAGAT CAACTTCGTC TCGATTTGCG CGGTATCGAT
GATGAGGCCG AATTGTTAGC CGAACTCAGC ACCTTAGGTG TGCAGCTATG A
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| Protein sequence | MIQMMTQVPD TPQALYRALP SMDSLLADAI LAPLLQSYGK AAVKAALDSQ LRTARELIAQ
ERRLPAWCAN PSLLNGYLVD QLSKDYSHSL KPVWNLTGTI LHTNLGRAQQ SEAAIRAVTS
VMRYPTPLEF ELAAGERGHR DNAISGLIQR LTGAEACCVV NNNAAAVLLM LSAVAAGKEV
IVSRGELVEI GGAFRIPDIM RQAGCTLVEV GSTNRTHLKD YEQAITENTA AIMKVHTSNY
HISGFTASVD EARLGQLCRE RGVALISDLG SGSLTDLRRF GLKQEPTPQA MLADGVDLVS
FSGDKLLGGP QSGLIVGKQA LINKLQSHPL KRALRCDKLI LAALEATLIH YLNPESLDRE
LPIMAKFARS QAELRQIGER LQRALAPLFA PSYGIELVEC QTQVGSGSQP DTFLPSIALC
FNAQEGGSLT LLEQHFKQAQ RPVIGRMTQD QLRLDLRGID DEAELLAELS TLGVQL
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