| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0098 |
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| Symbol | |
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| ID | 4250977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 108410 |
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| End bp | 109117 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 638116640 |
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| Product | histidine utilization repressor |
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| Protein accession | YP_732236 |
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| Protein GI | 113968443 |
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| COG category | [K] Transcription |
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| COG ID | [COG2188] Transcriptional regulators |
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| TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTACGC CTAAGTTTGC AGAAATTAAG CAATATATCA TTGGCTGTAT CGAGTCTGGT
GAGTGGGAAG AAAATGCCCG TGTCCCCTCG GAAAATCAGC TAGCCGAACT GTTTGTCTGT
AGCCGTATGA CGGCGCGTCG CGCCTTGACC GAGCTGACAG ACAACGGCGT GCTTGAGCGT
TCGCAGGGGC TGGGCACCTT TGTGGCCGGG CGAAAGTCGC AATCCTCGAT GTTGGCAATC
CGCAACATTG CCGACGAAAT CAAAGACCGT GGTCATGGTT ACAGTGTGCA GCAGTTAGCA
CTTAAACAAG TGAATGCCAC CGCGCCTATC GCCATCGCAC TGGCGCTGGA GCTCGGAAGT
CCGGTGTTTC ATTCGGTGTT AGTGCATTGC GAGCAGGGCG TGCCGCTCCA AGTCGAGGAG
CGTTATGTGA ATCCTGCCTT TGCGCCCGAC TATTTGGCGC AGGACTTTAG CGAGCAGACG
CCCCATGAGT ACCTGTCGCA GGTGGCTCCG CTGACCGAGG CGCACCACAC CATCGAAGCC
ATTATCGCCA GTAGCGAATT GCAGCAGAGG TTAGCCATTC CGGCGACTGA ACCCTGTTTA
CAGATTTCAC GCCGCACTTG GTCGCGCCAA GGGGTGGTGA GTTTTGCCAA ATTAGTACAC
CCGGGGAGCC GCTTTAAGCT CGGCGGACAC CTGACATTCA ATAAATAG
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| Protein sequence | MATPKFAEIK QYIIGCIESG EWEENARVPS ENQLAELFVC SRMTARRALT ELTDNGVLER
SQGLGTFVAG RKSQSSMLAI RNIADEIKDR GHGYSVQQLA LKQVNATAPI AIALALELGS
PVFHSVLVHC EQGVPLQVEE RYVNPAFAPD YLAQDFSEQT PHEYLSQVAP LTEAHHTIEA
IIASSELQQR LAIPATEPCL QISRRTWSRQ GVVSFAKLVH PGSRFKLGGH LTFNK
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