Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0097 |
Symbol | |
ID | 4250976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 106986 |
End bp | 108212 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638116639 |
Product | imidazolonepropionase |
Protein accession | YP_732235 |
Protein GI | 113968442 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | [TIGR01224] imidazolonepropionase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTGGG ATCAGGTTTG GATAGACGTT AACGTAGCAA CAATGGACCC TTCCATATCA GCACCTTACG GCGCAATTAC CAATGCAGCT ATCGCAGTAA AAGACGGTAA AATTGCCTGG TTAGGCCCAC GCAGCGAGCT GCCCGCCTTC GATGTGTTGT CCATTCCTGT TTACAGGGGC AAGGGCGGTT GGATCACTCC TGGGCTGATT GATGCCCACA CCCATCTGGT ATTTGCCGGT AATCGTGCCA ACGAATTCGA GCTACGCCTA AAGGGCGCTA CCTATGAGGA AATCGCCCGT GCTGGCGGCG GCATTATTTC CACGGTTAAC GCCTGCCGTG AGGCCGACGA AGCCGAGTTA TTTGATCTCG GCCGCCAACG TTTAAATGCC TTGGCGAAGG AAGGTGTCAC TACGGTTGAG ATTAAATCTG GCTATGGTCT AGATACCGAA ACCGAACTCA AAATCCTGCG TGTTGCCCGC GAACTCGGCC AACATCACCA TGTGGATGTG AAGACCACCT TCCTCGGTGC CCATGCGGTG CCGCCCGAGT TTAAAGACAA TAGCGACGGC TATGTCGACT TAATAATCAA TAAAATGCTG CCTGCGGTGA TTGCCGAAAA TCTTGCCGAT GCGGTGGATG TATTCTGTGA AAACATCGCC TTTAACCTAG AGCAAACCGA GCGCGTGCTG AGCGCCGCCA AAGCGGCTGG CCTGCAAGTC AAACTGCACG CCGAGCAATT ATCCAATATG GGCGGCTCTG AATTAGCCGC ACGCTTAGGG GCTAAGTCGG TTGATCATAT TGAATATTTA GATGAGGCTG GTGTTAAAGC CCTAAGTGAA AGTGGCACCT GCGCCGTGCT GTTACCGGGC GCGTTTTACT TTTTGCGGGA AACCCAAAAA CCACCTATCG ACTTATTGCG TCAATACGGT GTGCCTATGG TGCTCGCCAG CGACTTTAAT CCCGGCTCAT CGCCCATCTG TTCGACCCTG CTGATGCTGA ACATGGGTTG CACCCTATTC CGCTTAACAC CAGAGGAAGC GCTTGCGGGT TTAACATTGA ATGCCGCCAA GGCACTAGGG ATTGAAGAGA ATGTCGGCAG CTTGGTGGTT GGTAAGCAGG CGGATTTCTG TCTGTGGGAT ATCGCCACCC CGGCGCAACT CGCCTATAGC TACGGCGTGA ATCCCTGCAA GGATGTGGTG AAAAACGGTA AGTTAGTGCA TCAATAA
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Protein sequence | MSWDQVWIDV NVATMDPSIS APYGAITNAA IAVKDGKIAW LGPRSELPAF DVLSIPVYRG KGGWITPGLI DAHTHLVFAG NRANEFELRL KGATYEEIAR AGGGIISTVN ACREADEAEL FDLGRQRLNA LAKEGVTTVE IKSGYGLDTE TELKILRVAR ELGQHHHVDV KTTFLGAHAV PPEFKDNSDG YVDLIINKML PAVIAENLAD AVDVFCENIA FNLEQTERVL SAAKAAGLQV KLHAEQLSNM GGSELAARLG AKSVDHIEYL DEAGVKALSE SGTCAVLLPG AFYFLRETQK PPIDLLRQYG VPMVLASDFN PGSSPICSTL LMLNMGCTLF RLTPEEALAG LTLNAAKALG IEENVGSLVV GKQADFCLWD IATPAQLAYS YGVNPCKDVV KNGKLVHQ
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