Gene Shewmr4_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0096 
Symbol 
ID4250975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp105536 
End bp106282 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content50% 
IMG OID638116638 
ProductFAD-binding 9, siderophore-interacting domain-containing protein 
Protein accessionYP_732234 
Protein GI113968441 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2375] Siderophore-interacting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAC CCGCCCCGCG CGAATTGACC GTGATAGGTA AAACCCAAGT CACGCCACAT 
ATGCTGCGTA TCACTTTAGG TGGCGATGGC TTTGCAGGTT TTCCCGCCGA TCAAGAAAGC
GCCTATATCA AATTACTGTT TCCGCAGCCG GGGGATGAGC GGCCATTAAT GCGCACTTAT
ACCATTCGTC AGCAGCGGAT GAATGAAATC GATGTGGACT TTGTGTTGCA CGATACCGAT
GGCCCCGCAT CCCGTTGGGC AAAGTCGACC GAGATTGGGG ATACAATCCA AATCGGTGGC
CCCGGACTGA AAAAATTGAT CAATTTAGAT GCCGAATGGT TTTTACTGGC AGGGGATATG
ACGGCCTTGC CCGCCATCAG CGTGAACTTG GCGCAATTGC CAAGAAATGC AGTGGGTTAC
GCTGTGATTG AGGTGCTAAG TGAAGCCGAT ATTCAGCCCT TAGTGCATCC TCGTAATGTG
CAACTGCATT GGGTGATTAA TCCAGAGGCC GACCCAGAAG GTAAGCCCTT GGCCGAACGC
ATTGCCCAGT TGCCAAAACT CGAGGGGCAA GGCGCCGTAT GGCTCGCCTG CGAATTTAGC
AGTATGCGCG CCCTAAGAAA GCTGCTTAAG CAGACATACG ACTTACCGAA AAGCCATTTT
TATACATCAA GTTACTGGAA AATCGGCTGT AATGAAGGCG AGCATAAGCT GGTAAAACAG
CAAGATGAGC AGTTAGAAAA CCAATAA
 
Protein sequence
MNRPAPRELT VIGKTQVTPH MLRITLGGDG FAGFPADQES AYIKLLFPQP GDERPLMRTY 
TIRQQRMNEI DVDFVLHDTD GPASRWAKST EIGDTIQIGG PGLKKLINLD AEWFLLAGDM
TALPAISVNL AQLPRNAVGY AVIEVLSEAD IQPLVHPRNV QLHWVINPEA DPEGKPLAER
IAQLPKLEGQ GAVWLACEFS SMRALRKLLK QTYDLPKSHF YTSSYWKIGC NEGEHKLVKQ
QDEQLENQ