Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0085 |
Symbol | |
ID | 4250964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 96964 |
End bp | 97317 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638116627 |
Product | MerR family transcriptional regulator |
Protein accession | YP_732223 |
Protein GI | 113968430 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATATTG GTGCTGTGGC GAAGCAAACT GGCCTGTCGA TCAAGGCGAT TCGCCTCTAC GAGGAGTGGG GACTGATCAG TGCGCCGATC CGTAAGGGGC GTTATCGCAC TTATAGCGCA ACCGATATAA AGCAGTTAAT GCTGATCAAA GAGGCCAAAA CCTTAGGTAT CAAACTCTCG CAACTTAAAG ACTTGTTTAC CGAGGGGGAG CAGGCGGCGC AGCTTGAGTC TGTGCAGCAG TTTTTATTGA ATATCAAAGC CGATTTCCAG CGGCAGATTA GCGAATTAGA AGATAAATTA GTCAGGCTCG ATGCCTGTAT TGATGGTTTG GATACCTGTG AATCCCGCGC CTAA
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Protein sequence | MYIGAVAKQT GLSIKAIRLY EEWGLISAPI RKGRYRTYSA TDIKQLMLIK EAKTLGIKLS QLKDLFTEGE QAAQLESVQQ FLLNIKADFQ RQISELEDKL VRLDACIDGL DTCESRA
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