Gene Shewmr4_0085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0085 
Symbol 
ID4250964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp96964 
End bp97317 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content48% 
IMG OID638116627 
ProductMerR family transcriptional regulator 
Protein accessionYP_732223 
Protein GI113968430 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATTG GTGCTGTGGC GAAGCAAACT GGCCTGTCGA TCAAGGCGAT TCGCCTCTAC 
GAGGAGTGGG GACTGATCAG TGCGCCGATC CGTAAGGGGC GTTATCGCAC TTATAGCGCA
ACCGATATAA AGCAGTTAAT GCTGATCAAA GAGGCCAAAA CCTTAGGTAT CAAACTCTCG
CAACTTAAAG ACTTGTTTAC CGAGGGGGAG CAGGCGGCGC AGCTTGAGTC TGTGCAGCAG
TTTTTATTGA ATATCAAAGC CGATTTCCAG CGGCAGATTA GCGAATTAGA AGATAAATTA
GTCAGGCTCG ATGCCTGTAT TGATGGTTTG GATACCTGTG AATCCCGCGC CTAA
 
Protein sequence
MYIGAVAKQT GLSIKAIRLY EEWGLISAPI RKGRYRTYSA TDIKQLMLIK EAKTLGIKLS 
QLKDLFTEGE QAAQLESVQQ FLLNIKADFQ RQISELEDKL VRLDACIDGL DTCESRA