Gene Shewmr4_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0079 
Symbol 
ID4250958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp91647 
End bp94136 
Gene Length2490 bp 
Protein Length829 aa 
Translation table11 
GC content49% 
IMG OID638116621 
ProductMORN repeat-containing protein 
Protein accessionYP_732217 
Protein GI113968424 
COG category[S] Function unknown 
COG ID[COG2849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTT CGATTCGTCG TTTATGCGCC GCGGCTGGTG CGGTGTTGCT CTCTTCTTTT 
GCGGTTATTC CTGCTGCACT TGCGGCGGAA TATGACAAAA TGGTTCACGG TCCCGTGGAT
CTTCCCAATG GCCAATGGCT CAATTTTTAT CAAAAAGATC AACAGGTATG GGGCGAAATG
CTCTACGGCG ATGCGCCTGG TGTACGCATT GACGATTACG GCCGCGCCGA AATCGTGGCG
GTGTTTTACT ATGACTTCGA CAAGGGCGGC ACTAAAGAAG TGATCGTCAT GCTCAAGGAT
GCCGATGGCC AGCATCTGCG GGGTTATGGT TTTGAGGGCG AGGAGTTGAC TAAACTGCCG
CGCTTGCAAG CCGTGCTCGA TGAAGTCGCA CCCACCATTA GCACCTTTAC CGTCGGCGGC
GTTCGCAAAG TATTAAGCCA GTTACCACCT CAGCAGTATC GTATGACCTA TGAGGCTGAG
GGCGTCCAAG ATCCTGACAT CAAAGCGATT CTTGATGGTG CCTCTAAACT CAAACCGACC
TTAATTGGTT ATCGCAACTC TGAAGGCACG GCGACGGATG TAAAAACCGC AGTGGAATAC
AAGCTGCGCT ATCCCCTGAC TCGCACCGAT AAGGATGCCG AGGGGCGTGA ACGAAAATAC
AGTCTGGTGG TAACCTTTGA TCGCAGCGCC TACGTCGAAG AAGATAGCAG CTTTATGCTG
GTGGCCATTG GTTACGAGGC CGATGACATC GATTGGCTTA AAAATGGCGG CGACAAAATC
CCTCGTACTG GGCCTTTTTA CGAATTTATG AGCATGGGCA GTACTTGGGC TGGCGTTGCC
AGTGAAGCCC ATTATGTGCA GGGTGAGCTG GATGGTCACT TTGCCGCCTA CGATGCCCGC
AATGGCAGTG TGATGTATGC CGGTGACTAT AAGCTGGGTA AGCAAGTGGG TAAGTGGATT
GAAGCCGACG GCCGTGAAAC CTATTGGGAA GGCGAGTACC TCGACGGTAA GAAACAGGGC
AAATGGGTGT TGCAGTCCAT GATGGATGAT GCCGATAACT ACGGCTTTAT TCACTACAAC
AAGGGTGTGC CCGATGGCCC GAGTGAAATC TATACCCCAG ATTACGATTC CAGCACCGAA
GGCGCGAAGA AGTTGTCCGA AAAGGGCATT TATCTCAATG GCGTAAAAGA TGGCGAGTGG
CTTGAGTCCG ATGGCAGCAA AGGCCAATAC CAAAAGGGCG TGAAACAAGG CGCTTGGGTG
GAAAAGGTCA CTCAAGGGGA TTATCGTTTT CAAACTGGTG AAGGCAGCTA CCTCGATGGT
AAGCGTTCAG GCACTTGGGT GTATATTCGC ACGCCCGATG AGAACGATGC TTTTACCACT
AAGCAATCGG TGACTTATCT CTACAAAACC GAAGTCAACT ATGAGAATGG CCTACACCAA
GGTGAGGCTA AGCTATTCAA TAAAGATAAT TTTATGTTCG CCCTCAAACA TTACGATAAG
GGCCGCCTCC ACGGCGAAAG TCTATGGTAC TCAGCGCCAA ATATCGTCAG CAATGTTGCC
AATTATCGTC AAGGGGAGTT GGATGGCGAA CAAATGTGGC TCGAGCCTAA CGGCGATCTG
AATGAGCTGA GTCAGTATAA GTTTAATGAC GCCGTAAAGC TTAAGCCTTC GCAGGATGAA
TGCATGATGC GAAAAGAGCC CTACGCAGGC GATTGTGAGG GGGTGTTAAG TTCAAAAAAT
GCTGAAACTA GCTCTATTAA AGACGGTGAG CAACGTGTAT ATCGCGGCGG CCAACTATCC
GAATTAAGCT ATTACACTAA TGGGTCAGTC GATAAAGAAT ATCGATTCGA TTCTAACGGT
CGCTTAATGT CCTTGCAGAC TTATAAAGCG GGTCTGGAAT ACGGCCCAAG CATCCGCTAT
TCCACCGACG GCGGCTATTC GCTCGTGCAA TATGGTCATC TTATCAATAA CCGTCTTTCT
GGCCCCCATT ACACTTTCTA CCCGAACGGC CAGTTAAAGA GCTTGTGGAA CTATTGCCAG
CAAGAAGGCG AAACCTGGAA CGGTGAACCT TATTTCTGGG ATAACGCCAT TGCGCGCTGT
GGTATCCAGC GGGAGTATTT TGATAATGGT GCCGTGAGTT GTATCGAGGA TCTCGACAGC
AATTATGCCG TGGATAAAGT CTGTTACGAC CGCAATGGTA AGTTAGCCAG CGAAATGCTG
CGTATTGACG AGCAGCATGT GGTGCATAAG CGCTATATGA ACGGTGTTAT CTATCAAGAG
GAACCCGGAT TCTCGGATTT TTCCCATGTG ACTAAGGGGC GCAAAATCTA TCACTTAGAA
AACCCTAAAA GCCATGGTGT GTTTAAGTCC TACGACAGCA GCGGCAAGCT CAAATACGAA
AAAATATTCG ATATGGGTAA GGCTGGCTGT ATGAAAAAGT ACGATGCTAA CGGCAAGCAA
ACCCCAGAGA CCGCGAGCTG CCAGTTCTAG
 
Protein sequence
MELSIRRLCA AAGAVLLSSF AVIPAALAAE YDKMVHGPVD LPNGQWLNFY QKDQQVWGEM 
LYGDAPGVRI DDYGRAEIVA VFYYDFDKGG TKEVIVMLKD ADGQHLRGYG FEGEELTKLP
RLQAVLDEVA PTISTFTVGG VRKVLSQLPP QQYRMTYEAE GVQDPDIKAI LDGASKLKPT
LIGYRNSEGT ATDVKTAVEY KLRYPLTRTD KDAEGRERKY SLVVTFDRSA YVEEDSSFML
VAIGYEADDI DWLKNGGDKI PRTGPFYEFM SMGSTWAGVA SEAHYVQGEL DGHFAAYDAR
NGSVMYAGDY KLGKQVGKWI EADGRETYWE GEYLDGKKQG KWVLQSMMDD ADNYGFIHYN
KGVPDGPSEI YTPDYDSSTE GAKKLSEKGI YLNGVKDGEW LESDGSKGQY QKGVKQGAWV
EKVTQGDYRF QTGEGSYLDG KRSGTWVYIR TPDENDAFTT KQSVTYLYKT EVNYENGLHQ
GEAKLFNKDN FMFALKHYDK GRLHGESLWY SAPNIVSNVA NYRQGELDGE QMWLEPNGDL
NELSQYKFND AVKLKPSQDE CMMRKEPYAG DCEGVLSSKN AETSSIKDGE QRVYRGGQLS
ELSYYTNGSV DKEYRFDSNG RLMSLQTYKA GLEYGPSIRY STDGGYSLVQ YGHLINNRLS
GPHYTFYPNG QLKSLWNYCQ QEGETWNGEP YFWDNAIARC GIQREYFDNG AVSCIEDLDS
NYAVDKVCYD RNGKLASEML RIDEQHVVHK RYMNGVIYQE EPGFSDFSHV TKGRKIYHLE
NPKSHGVFKS YDSSGKLKYE KIFDMGKAGC MKKYDANGKQ TPETASCQF