| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0078 |
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| Symbol | |
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| ID | 4250957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 89713 |
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| End bp | 91506 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116620 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_732216 |
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| Protein GI | 113968423 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCG AACAATATCA CGTAATTCGA CTATTACAGC AGCAAAGCCA GTCATTAAAA
GAGGCTATAG CGCTGGAAGG TTTTGAAATG GCTGCGCCTT GGCATCAAGT CAGTTGGCAG
GCATTCGATC AAATCAGCCA TAAAATTGCA CAGGTGTTGA TTGAACTTGG CGTACAAGTG
CAAGACCGTT GCGTGATCCT GTCGCAAAAC TGCCCTCAAT GGACCTGCGC CGACATAGGT
ACCCTGAAAA GTCGTGCCGT TGTGGTCCCC ATTTACCCGA CCAGTACCTT AGAGCAAGCC
AGCTTTATCA TTAACGATGC GGCGGCTAAG GTGATTTTTG TCGACGACGC TAAGCAATAT
GCGCTGGCCT GTGAGCTGCA AAAACAGTGT CCAACCCTAG AGCATGTGAT TGTGTTTGAC
GCGAGTGTTG AGCTGGCGCA GGACAAGGCT CAACATCAGC ATTTAGACAG TTTGCTAGCC
AAAGAATATG GCCAGAGTGC TGAGCTTGAG CAGCGCTTAA AGGATGCCAA TCTCGACGAC
CTGTTAACCC TAATTTATAC CTCTGGTACC ACGGGCGACC CTAAGGGCGT GATGCTGGAT
TACCGCAATA TGGCTTCGAC TGTGCGTCAG CACGATCAGA TCCTGCCGTT TACCACTGGC
GATGTGTCGT TAGCTTTCCT ACCGCTAAGC CATGTGTTTG AGCGTGGTTG GAGCTTCTAT
GTGCTGTGCC GTGGCGGCCA CAACGTGTAT CTGCAAAACA CCCAAAGAGT GAAAGAGGCC
ATCAGCGCCG TGCGTCCGCA TACCCTGTGC GTGGTGCCGC GTTTCCTCGA GAAGGTTTAC
AGCGCAGTGC AGGATAAGGT CGCTAAATCC GCCGAAGGCC GTAAAAAACT CTTCGCCTGG
GCCATGGGCG TCGGCGAACG CCAGTTTGAG GTGAGCCAAG GCCGCGCTAA GGGCGGTTTA
TGGTTATCCT TGCAATGGCG TTTAGCGCAC AAGCTGGTTT ACAGCAAGTT GCAAGCCGTG
CTCGGTGGGC GCTTAAAGTT TATGCCCTGC GGTGGCGCCG CCCTCGATTT AAACGTGGCG
TCTTTCTTCC ATGCTATTGG TATTCCGGTA CTTTGTGGTT ACGGCATGAC GGAAACGAAC
GCCACAGTGA CCTGTAATAC CCTAGATAAC CGAGTTGCGG GTTCGAACGG TAAAGTATTG
CCCGAAATCG AGGTGAAGCT AGGTAAGGAC GATGAGATTT TAGTCCGTGG CGACACTGTG
ATGCGCGGTT ATTACAATCG CCCCGAAGAC ACTGCAGCTG CCTTCGAAGA TGGCTGGTTA
AAGACTGGCG ATGCGGGACG ACTCGATGCC AATGGCAATT TATTTATTAC CGACCGCATC
AAAGAGTTAA TGAAAACTTC CAACGGTAAA TACATTGCTC CGCAGCGGGT TGAAGGCACA
GTGGGCCGTT GCCCCTTTAT CGAACAGGTG GCTGTGATTG CCGATGCCCG TAACTATGTG
ACGGCGCTGA TTGTGCCAGC CTTTGAATCC CTCGAAGCCT GGGCCAAGGA TAAGGGCTTG
AAATACGAGT CGTCTATCGA GCTGCTGCGT CACAGCCATG TGGTTGAACA TTTCGAGCAG
CGCTTAAAGC ATTTGCAGCA AGAGTTGGCG GGGTTTGAGC AAATCAAAAA GTTTACCCTG
TTGCCTGAAG CCTTTTCGAT GGAGGCGGGA TTAATCACCC CGACGCTGAA ATTGCGCCGC
AAAATGATTT ACCACAAGTA CGCCCACGAA ATTAATGCGA TGTACAATAA TTGA
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| Protein sequence | MSLEQYHVIR LLQQQSQSLK EAIALEGFEM AAPWHQVSWQ AFDQISHKIA QVLIELGVQV
QDRCVILSQN CPQWTCADIG TLKSRAVVVP IYPTSTLEQA SFIINDAAAK VIFVDDAKQY
ALACELQKQC PTLEHVIVFD ASVELAQDKA QHQHLDSLLA KEYGQSAELE QRLKDANLDD
LLTLIYTSGT TGDPKGVMLD YRNMASTVRQ HDQILPFTTG DVSLAFLPLS HVFERGWSFY
VLCRGGHNVY LQNTQRVKEA ISAVRPHTLC VVPRFLEKVY SAVQDKVAKS AEGRKKLFAW
AMGVGERQFE VSQGRAKGGL WLSLQWRLAH KLVYSKLQAV LGGRLKFMPC GGAALDLNVA
SFFHAIGIPV LCGYGMTETN ATVTCNTLDN RVAGSNGKVL PEIEVKLGKD DEILVRGDTV
MRGYYNRPED TAAAFEDGWL KTGDAGRLDA NGNLFITDRI KELMKTSNGK YIAPQRVEGT
VGRCPFIEQV AVIADARNYV TALIVPAFES LEAWAKDKGL KYESSIELLR HSHVVEHFEQ
RLKHLQQELA GFEQIKKFTL LPEAFSMEAG LITPTLKLRR KMIYHKYAHE INAMYNN
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