| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0074 |
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| Symbol | |
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| ID | 4250953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 85302 |
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| End bp | 86909 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638116616 |
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| Product | TAP domain-containing protein |
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| Protein accession | YP_732212 |
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| Protein GI | 113968419 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.523955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGATA GCATGATCCA CAGGAAGTCC CATAATGCCA GCGCTGACGT GGCAATGAAG
CGCATTGATA CGCACCAGCT CTCGAGCAAG TTAAGCAAAA GCATCATCAG TTTGAGTGCG
CTGATGCTCG CCATGGGTAG CGCCACGGCT TGGGCGAGCG ACAACTCAGT AAAGCCCACT
GAATCCGCCA ACACCTGTTA TGTGGAGGGC GTGTCGGACC GCTTAAACTG CGGCTTTGTC
ACTGTGCCGG AAAACCCTAA TAAGCCCGAT GGCAAACAGA TCCAAGTGCA TTATGTGGTC
TTGCCCGCGG TGAAAAACGT CAACCACGAA GAGGCCTTAC TGGCGATCGC CGGCGGCCCA
GGTCAATCGG CCATAGATAA CGCGGCAGGC TTCGATAGCA TGCTGAACAA AGTGCGCCAG
CAGCGCGACA TTTTGCTTAT CGATCAACGG GGCACAGGCC GCTCGAATCC ACTAAACTGC
GACTCAGGCC CGCAATCTCC GCTCGCCATC GACGAGGATA ATGTCGATAC CTTGGTCGAG
GCACAAAAAT GCCGCGATCA ATTCCCCGAT ACTGACGTCA CCCAATATGG CAGCCTCAAT
GCGGTGCAAG ACTTCGAAGC CGTACGCGCC AAGTTAGGCT ATAAGAAACT GCACCTCTAC
GGTATCTCCT ACGGCACACG TATGGCGCAG CTCTATATGC GCTTATATCC CGAGCACTTA
GCCACAGTCA CCATAGACGG CATTGTGCCC ATGCAGCAGA GCGTATTGGA GATTGGCTCG
GCGATTGAAC GTGGCTTTGA CTTGCTGTTT AAAGACTGCC AAGACACAGC CGCCTGCCAT
GCCGAGTTTC CTGAGCTCAA AGCCGAGTTT GACCAAGTAG TCGCTAAACT CAGCCAAGGG
CCAGTGATGG AGCAAGTGCA CGACCCTGTG ACGGGAGAAA AGACCCTACT CACTATGACT
CGCTCAAAGT TTTATGGCGC GATCCGCATG GCGCTGTATC AAACCAATGT GCGCGCCTTA
GTGCCCCATG CGATTCATCA GGCCGCTAAG GGTAACTACC AACCATTACT CGGGTTATTT
GCCTTAACTA CGGATAATGC GGGTATGGCA ATGGGCATGC ACGCCTCCGT CGTCTGCGGC
GAAGACATGC ACCGCATCAC TCCGGCGATG CGTGAACAGG CCAAAAACTC CTATGTCGGC
AAAACCATGC TCGAGAGCCT CGAAACCTCG TGCTCTGTGT GGAAGGTGCC TGCGGTCGAT
GCCAGCTTTA GCGAGCCTAT CAAGAGCGAT ATCCCCACAC TGTTGCTGTC GGGCGAAATT
GACCCAGCAA CCCCACCGAG CTGGGGTGAA CTGGCGATGG AAAAACTCAC TAACGCCAAA
CACTTTGTCG CGCCATACGC CACCCATGGC GTGGCCTATC AGTCCTGTGC CAATAACTTA
ATCGCCGAGT TAGTGCGTAC TGGTTCGGTC AAAGATCTCG ATGGTGAATG TTTGAAGAAG
GATGTACGCC GTAGCTTCTA TTTAAATGCC AGCTCGGTTG AGCCACTCGC GACCGAAGCC
GCAACCCAAT CAGCCAAGGA TAAGCCCAGC ACTGGTGCCA AGGAGTAA
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| Protein sequence | MIDSMIHRKS HNASADVAMK RIDTHQLSSK LSKSIISLSA LMLAMGSATA WASDNSVKPT
ESANTCYVEG VSDRLNCGFV TVPENPNKPD GKQIQVHYVV LPAVKNVNHE EALLAIAGGP
GQSAIDNAAG FDSMLNKVRQ QRDILLIDQR GTGRSNPLNC DSGPQSPLAI DEDNVDTLVE
AQKCRDQFPD TDVTQYGSLN AVQDFEAVRA KLGYKKLHLY GISYGTRMAQ LYMRLYPEHL
ATVTIDGIVP MQQSVLEIGS AIERGFDLLF KDCQDTAACH AEFPELKAEF DQVVAKLSQG
PVMEQVHDPV TGEKTLLTMT RSKFYGAIRM ALYQTNVRAL VPHAIHQAAK GNYQPLLGLF
ALTTDNAGMA MGMHASVVCG EDMHRITPAM REQAKNSYVG KTMLESLETS CSVWKVPAVD
ASFSEPIKSD IPTLLLSGEI DPATPPSWGE LAMEKLTNAK HFVAPYATHG VAYQSCANNL
IAELVRTGSV KDLDGECLKK DVRRSFYLNA SSVEPLATEA ATQSAKDKPS TGAKE
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