Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0073 |
Symbol | |
ID | 4250952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 84565 |
End bp | 85299 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638116615 |
Product | ABC transporter related |
Protein accession | YP_732211 |
Protein GI | 113968418 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG4555] ABC-type Na+ transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.334195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAG TATCCCATCT TTCTAAGCGC ATCGGCGAAG TGCAGGCCCT AAACGATTTG AGTTTCGTGG CCGAAAATGG CCAGATCACC GGCCTGCTCG GCCCCAATGG CGCGGGTAAA ACCACCTGTT TACGCACGAT TTTCGGGCTG TTAAAACCCG ACACTGGCAC GGCTGAAATT GAAGGTATCG ACGTTGCCAT CGACCCGATT GGCGCTAAGC AGCAGTTAGG CTTATTCCCC GACCCGTTCG GTCTGTATGA GCGCTTAACG CCGCGGGAAT ATATCCGTTA CTTTGCCGAA CTCAGCGGTT TATCCGCAAG CGATGCCAAG GCGGCCACCG ACAATGTCAT CGCCAAATTG CGCCTCGAAG ATATCAGCGA CCGCCGCTGT AAAGGCTTCT CCCAGGGGCA AAGAATGAAG ACCGCCCTCG CCCAGGCCAT AGTCCACAGC CCGAGCAATA TTATCCTCGA CGAGCCAACC CGTGGACTCG ATGTCATGAG CACTCGTTTG CTGCGCGACA TTCTTATCGA CCTTAAGAAT CAAGGGCATT GTGTGCTGTT TTCCAGCCAT GTGATGCAGG AAGTCGCGGC ATTGTGCGAC CAAGTGATCG TGATGGCGCA GGGCCGAGTG GTCGCCATCG GCAGCCCTGA ACAGCTCTGC GCGCAAACGG GTAAGTCCTC ACTCGAAGAT GCCTTTATCC AGCTGATCGG CACCGATGAG GGGATTGCCG CATGA
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Protein sequence | MIKVSHLSKR IGEVQALNDL SFVAENGQIT GLLGPNGAGK TTCLRTIFGL LKPDTGTAEI EGIDVAIDPI GAKQQLGLFP DPFGLYERLT PREYIRYFAE LSGLSASDAK AATDNVIAKL RLEDISDRRC KGFSQGQRMK TALAQAIVHS PSNIILDEPT RGLDVMSTRL LRDILIDLKN QGHCVLFSSH VMQEVAALCD QVIVMAQGRV VAIGSPEQLC AQTGKSSLED AFIQLIGTDE GIAA
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