| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0070 |
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| Symbol | |
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| ID | 4250949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 81980 |
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| End bp | 83023 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638116612 |
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| Product | transcriptional regulator |
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| Protein accession | YP_732208 |
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| Protein GI | 113968415 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.020859 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGA TCACTATTTT GGCGACGGAT AATACGGTTG CCAGCGGGAT TATTGGTTTT
CTCGATGTGT TTAGTTTCTG CAATACCTAT TGGCGGCGAG TCAATCCACA GGCCGAACAA
GACTTGTTTG AGTGCCAAGT GGTGTCGAGT CATGGCGGTG ATATCCTAAC GAATCAAGGT
ATTAAAGTGC CTGCCGTTGG GCTTAATACC CCGAGTGATA TTCTGCACTC CGATGCGGTG
ATTTTGGCTT CGGCCATGGT GACTAACAAG AACGAATTCC AAACCTATCT CAATGATTTT
GAATTCTTAT TTGAACCGTT AAGGCTATTT GCTGCCTCAG GTAAACCATT GGCAGCCTAT
TGCTCTGGCA CCTTGATTTT AGCGGCCTCC GGCCTGCTGG ACGGACGCGA GGCGACGACT
GTCTGGTGGC TGAATGAGAT GTTTCAGCGA CATTTTGCCA AGGTGAACCT GCGGATGGAC
AAGCTGGTGG TGTCCGACGG CCATCTGCAT ACCGCAGGGG CGACGACCTC GAATATGAGC
CTCGCCCTGC ATTTAGTGCA CATTTTGGTG GGTGAGCAGT TAGCAAGCCA GATGGCAAAA
ATCCTGCTGA TTGATCCTAA TCGCCAATCC CAACAACCCT TTATGACCAT GGATCTGATG
ACGTCGAGCC ATAAGGACGA GGTGATTTGG AATGTGCAGC AATGGATGCA GCATCATTTA
ACCGAACCCC TGTTACTGGA TGATATTGCT GATAAATTTG CTTTAGGTAA GCGCACCCTT
ATTCGCCGCT TTAAAAAGGC GTTAAACGAG ACTCCGGCCA GTTATGTGCA GCGTCTGCGG
GTGGATGAGG CAAAACGTCT ATTGGAAACG ACCAGTCTAG GCTTAGAGGA AGTGGTCACC
CGTGTGGGTT ATGAGGATGT CAGCTCGTTT CGCAAATTAT TCATTCAGCT AACGAGCTTA
ACCCCGAGGG CCTACAGGCA GCGCTTTAAT ACTCAGCAAT ATGAGTTTGA TAGCGACAAC
TGCTGCGAGG CCGAACTGCA TTAA
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| Protein sequence | MRRITILATD NTVASGIIGF LDVFSFCNTY WRRVNPQAEQ DLFECQVVSS HGGDILTNQG
IKVPAVGLNT PSDILHSDAV ILASAMVTNK NEFQTYLNDF EFLFEPLRLF AASGKPLAAY
CSGTLILAAS GLLDGREATT VWWLNEMFQR HFAKVNLRMD KLVVSDGHLH TAGATTSNMS
LALHLVHILV GEQLASQMAK ILLIDPNRQS QQPFMTMDLM TSSHKDEVIW NVQQWMQHHL
TEPLLLDDIA DKFALGKRTL IRRFKKALNE TPASYVQRLR VDEAKRLLET TSLGLEEVVT
RVGYEDVSSF RKLFIQLTSL TPRAYRQRFN TQQYEFDSDN CCEAELH
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