| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0063 |
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| Symbol | |
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| ID | 4250942 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 73081 |
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| End bp | 74109 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116605 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_732201 |
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| Protein GI | 113968408 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000367552 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACTA AAAACTGGAC CTTAAAGAGC ATAGCAAACG AGCTAGGTGT CTCTAACGCC
ACTGTTTCTA ATGCTTTTAA TCGTCCCGAT CAGCTATCGG AAAAACGTCG CAACGAGATT
TTAGCCGCCT GCTCTAAACT GGGGTATTTT GGCCCAAATA AGGCGGCGCA GTCCCTACGT
AGGGGCAAAT TTGATACCGT CGCGCTGGTA CTGTCCGATA GTGTTGAATA TATGGTGTCC
GATCCTGTCG CCAGTAAGTT TATGAAGGGG GTGGCTTCGG TATTGGAGCG GGAAAAACTC
AACTTACTGC TATTTTCTGG CAGCTCCGAC AGTGTGAATG CGGTGGCCGA TTTTGTGGAT
GGGTTTATTT GTTATGGTCG CCCGCGCAAT GCCTTGCTCG CCGAGCAATT AAAACAGGTT
AAGAAGAAGG TGGTTACTGT GGATTTTGAT ATCCACCGCA ACGCCTCTGT CAGCATTGAC
AATAAGTTAG CCGCCTATGA GGTGGCAAAA TTGGCGTTAA AATCTCCCAC CGATCAAGTT
GCAATATTGG GATTGAGGCT ACTCGATACC CATTTAACCT GCCGAGTTTA CGATTTGAAT
TTGCTCGAAA TCGATATGTC GATTGCGCAC CAGAGGTTGC AGGGATATTT ACAGGCGATT
GAGGAAACGG GTGTCACCCT TGGTAATGAT CGGATTTGGA ATATTCCGGA AAGTAATGCG
GAGTATGCGC GGATTGCGGC CAAGGAGGCA TTAAACTCAA CCCCAAGACC CAATGTATTT
TTATGCATGA GCGACTTAAT TGCCCTCAGC GTGCTGGGTG AGGCGCAGGC CATGGGATTA
GCGATTCCGG AGGATATTCG TGTCGTGGGA TTTGATGGTA TTGATGAGGC GACTCGCTCG
AATCCACCAC TGACCACGGT TTACCAATAC TCGGAACAAA AAGGCCAAAT GGCGGCGCAG
ATGTTTATCG ACGATGCCGT GCATGCTCAG GTATTAGGGT ATGAACTACG TTTAGGCAAA
AGCTGTTAA
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| Protein sequence | MTTKNWTLKS IANELGVSNA TVSNAFNRPD QLSEKRRNEI LAACSKLGYF GPNKAAQSLR
RGKFDTVALV LSDSVEYMVS DPVASKFMKG VASVLEREKL NLLLFSGSSD SVNAVADFVD
GFICYGRPRN ALLAEQLKQV KKKVVTVDFD IHRNASVSID NKLAAYEVAK LALKSPTDQV
AILGLRLLDT HLTCRVYDLN LLEIDMSIAH QRLQGYLQAI EETGVTLGND RIWNIPESNA
EYARIAAKEA LNSTPRPNVF LCMSDLIALS VLGEAQAMGL AIPEDIRVVG FDGIDEATRS
NPPLTTVYQY SEQKGQMAAQ MFIDDAVHAQ VLGYELRLGK SC
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