| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0061 |
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| Symbol | |
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| ID | 4250940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 71040 |
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| End bp | 71519 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638116603 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_732199 |
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| Protein GI | 113968406 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000041841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTTTTA CGCTAATGAA ACGATTACTG ATAGTTATCT TAGCCTTAGG TCTTGGCGCC
TGTGCGAGCG CGCCAGAACC TAAGCCTGTG GTGAAGCAAG TTGAACCTGT CTCCGTTTGG
AACGATAGCA ATATCGCCGA TTTCCATTCC GAATGGCGCG GCGTACCCTA TCGCCTAGGT
GGCGGCACTA AGAAAGGCAT CGATTGCTCG GCCTTTGTGT CGGTCGCTTA TCAAAAGATG
TTGGGCATGA CTCTGCCGCG CACAGTGGAA GAACAGCAAG CCCTCGGCAA ACCCGTGGCG
CGGGACCAAC TGCGTAAAGG CGACTTAGTG TTTTTCAAAA CGGGTTGGAG CACGCACCAT
GTCGGCATTT ATGTGGGCGG GAATAATTTT CTCCATGTCT CGACGAGCCA AGGGGTGAAA
ATTTCGAGCC TGCTAAACAG TTATTGGGCA TCAAAGTATT GGAATGCAAG GCGAATTTAA
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| Protein sequence | MSFTLMKRLL IVILALGLGA CASAPEPKPV VKQVEPVSVW NDSNIADFHS EWRGVPYRLG
GGTKKGIDCS AFVSVAYQKM LGMTLPRTVE EQQALGKPVA RDQLRKGDLV FFKTGWSTHH
VGIYVGGNNF LHVSTSQGVK ISSLLNSYWA SKYWNARRI
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