| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0053 |
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| Symbol | |
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| ID | 4250668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 61944 |
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| End bp | 62633 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638116595 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_732191 |
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| Protein GI | 113968398 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000176822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTTATA AGATCTTAGT GGTGGATGAT GAGCCGCAAA TCCATACCTT TATGCGGATC
TCACTCGAAG CGGAAGGCTT TGAATACTTA AGCGCCACCA GCATAGCCAC GGCGCTTAAA
CAATACCAAA GCCACCAGCC GCACCTTATT GTGCTCGACC TCGGCCTGCC CGATGGCGAT
GGTATCGAGT TGCTCCATGG GCTGCGCCAG CAGGATAAGA CCCCAGTGCT GGTGCTCACC
GCTCGCGATC AGGAGGAAGA AAAAATCCGT CTGCTCGAGG CTGGTGCTAA CGATTATCTG
AGTAAGCCCT TTGGCATCAG GGAATTAATC GTGCGTATCA AGGTATTAGT CCGTGATCTT
GTGGATACCT CAAGCACCAT CGATATGCTG CAATTTGGCC CGCTCACCCT ACAAAAGAGC
AGCCATCAAT GCTGGCTGAA TCAACAGGAA GTGGCGCTTA CCAAGAAGGA ATTTGCCCTG
CTCGCCCAAC TCATGTCCCA CCCAGGGCAA TTACTGAAAC AGAGCGAACT GCTGCGCAAT
ATTTGGGGCG AGACTCACCA GGAAGATAGC CACTATCTGC GGATTTTAGT CCGCCAACTG
CGTAAAAAGC TTAACGACAG CGACGAACAA CAACTGATCA AAACCGAGCC CGGCTTAGGG
TATCGACTCA CCGACCTCGG CCCGCCCTAG
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| Protein sequence | MAYKILVVDD EPQIHTFMRI SLEAEGFEYL SATSIATALK QYQSHQPHLI VLDLGLPDGD
GIELLHGLRQ QDKTPVLVLT ARDQEEEKIR LLEAGANDYL SKPFGIRELI VRIKVLVRDL
VDTSSTIDML QFGPLTLQKS SHQCWLNQQE VALTKKEFAL LAQLMSHPGQ LLKQSELLRN
IWGETHQEDS HYLRILVRQL RKKLNDSDEQ QLIKTEPGLG YRLTDLGPP
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