Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0050 |
Symbol | |
ID | 4250665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 58053 |
End bp | 59630 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638116592 |
Product | hypothetical protein |
Protein accession | YP_732188 |
Protein GI | 113968395 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000492691 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATACAA ATAAACCTTT AAGATTTTTT GATTTTTCTT CTGCAGATAA TCCGCTCGTT GAAATTCAGA GGAGATTGGG ATCTCAACAG TCTCGTTATG TATCTAAGTA CTTGAATTTT TTGGGTGCAA AAAAAGTATT AGTTGAGGAT AATTACTTCG ACAGGGACTA TCTTAATGAA TTCTCCGCAT TTTATAGTCT TAGTGCCAAA GGGTATCCAA ATATTTGTCA ACGCCTTCAT TTTTTTTCTA CTATGCGGCT CGATAGAGAG TTGTTTGTTA GTGCGGTTGG AGGGGACGAA AGTGCTATTG ATGAGCTTCA AAATGGTTAT TTAGGGTTTA TAGTTGTTAG GCCTATTACT GATTCACCTT TTGGTAGAAC GGTGTTGAAG TGGTATCCAG ATCAAACACC GGGAACGCCA AGAGTTACAC AACCATCTAG AGATTATGTA TGCAATGTTG CTGGACTAGA GTTTTGTGTT CATGGATTGG CATGGCAGCA GCAAGATTCT GGCGTCGCTG CATGCGCTAC AATTGGTATT TGGAGCATGC TTCACTCCTC AGCATTTAAT GAATGTAATG CCATCCCAAC AACATCAATG ATAACTGAGG CTGCACATTC TTCTGCACTT GTAGGGCGTC CACCTTATCC ATCGCATTTC CTTAGAATTG ATCAAATACA ACATGCGATT ATTCAACTTG GTTTTTCACC AGCCATAACT AATGGTGAAT TAGTTGGCCA ATTCTTTACT ACTGCTCGGT TTGCAAATAC TTGCGCAGCA TATCTTCGAT CTGGCTATCC TCTCCTAATT GGGGGCGTCC ATGGTGATGG TGTACCAGTT GGTCATGCTG TTTGTGCTGT AGGATTTAGG GAGCCAGCTC CTCAACAAGG AGGTGGTATT GCTGAGGTAT CTTTACAAGA TGATAATATT TCATACCTCT ATATTCACGA TGATAATATT GGACCAAATG TTAGATTTAA ATTAATCACA CAAAAAGTCC ATGAAGGAAC TCCTGAAGAG TTTGAACGCT GTGTTATGAA AATGGAGACT CCTGCTTACC TAAATGTTGG TGCGGCTGAA AACCTTGATA ATACAACAAT TATACCTCAA TCCATTATTG CTGCTGTTCA TCCTGATCTT AAAATAACTT CAGATAGTTT TTTTCGACAT GGTATATCTC TAACTGGAAG TTTACATGCC GCATTAAAGG AATATACGGA AGGAATGAAT ATTGAACCAA CATCACTTGT TTTTAGCACT CGTTTTGTGA TGTTGAAAGA TTACTTATCA ATTGAACTAA AGAGACAGTT AGGGAGCGAG CCTGATTTAT TATCTAACAC TAGAATTCAG CTCCAAGAAA ATGTACCGCC AATGAGTCTA CATTTAGCAT TACTTAGAAT TGCGATGCCA GATGCATCTG TATTAATTGA TGTTTTGTTT GATACAACAG ATACGGACAA AAACAGATCT GTTTTTTGTC ATGTTGTATA TGACCTAACA TTTGCGAATT TTCTAGACGT ACTACAGACT AATGTAAGAG AACGATTTTT AGGGGTGTTT GTGAAAGCAT ATAAATAA
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Protein sequence | MNTNKPLRFF DFSSADNPLV EIQRRLGSQQ SRYVSKYLNF LGAKKVLVED NYFDRDYLNE FSAFYSLSAK GYPNICQRLH FFSTMRLDRE LFVSAVGGDE SAIDELQNGY LGFIVVRPIT DSPFGRTVLK WYPDQTPGTP RVTQPSRDYV CNVAGLEFCV HGLAWQQQDS GVAACATIGI WSMLHSSAFN ECNAIPTTSM ITEAAHSSAL VGRPPYPSHF LRIDQIQHAI IQLGFSPAIT NGELVGQFFT TARFANTCAA YLRSGYPLLI GGVHGDGVPV GHAVCAVGFR EPAPQQGGGI AEVSLQDDNI SYLYIHDDNI GPNVRFKLIT QKVHEGTPEE FERCVMKMET PAYLNVGAAE NLDNTTIIPQ SIIAAVHPDL KITSDSFFRH GISLTGSLHA ALKEYTEGMN IEPTSLVFST RFVMLKDYLS IELKRQLGSE PDLLSNTRIQ LQENVPPMSL HLALLRIAMP DASVLIDVLF DTTDTDKNRS VFCHVVYDLT FANFLDVLQT NVRERFLGVF VKAYK
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