| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0043 |
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| Symbol | |
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| ID | 4250659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 49674 |
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| End bp | 50879 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638116586 |
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| Product | C-terminal processing peptidase-3 |
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| Protein accession | YP_732182 |
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| Protein GI | 113968389 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000408883 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAAC TAATCCGCAA TATCGTCTGC CTTGGACTCG GCCTAAGCCT AGGTCTGTCC
ATTAGCCTCT CCAGCCAAGA GAATGCCAAG TCATATCAGA GTGACTTCGA CTACCCGCTA
TTGCAGGATG TATTAGAAAC GGTCGAAACC TATTACGTTA AAACCGTTTC CAAAGATGAG
CTGGTGCAAG CCGCCATTAA AGGGATTTTT GAGCACTTAG ATCCTTATTC CAGCTTTTTA
AATCACCAAG AATTACTCGA CTTAAAAGAC TCAAATCGCG GCGAATACTT CGGCTTTGGC
TTTGAGGTCG CCAGCGATAA AGACCATATC AGCATTATCG CGCCCTTTGC CAATTCCCCC
GCCGAACAGG CCGGTATCCA AGCGGGCGAT ATCATTATCA AGCTGAATAA CACCCCAACC
ACCGAAACCA ATCTTGCGGA TATCCTCAAT CAAATCAAAC AACATAGCAT TAACAATCAA
AGTATTCGCC TGACGCTTAA ACACCGTAAT GATGCCGTGG AATTTGAGGT ATCCCTTAAG
CCCAGCACTA TTACTATTCA ATCTGTCGCC AGCAAATTAC TGGATGGTAA TATCGGCTAC
ATTAGGCTCA GTAGCTTTCA AGAGAACTCC ACCGAAGACA TGGTGCGCAG TTTAAGCCAG
TGGCAAAACG CGCATCTTAC GGGTTTGATA TTAGATTTAC GCAATAATCC CGGCGGCTTG
CTGGATCAGG CAATCAAGAT TGCTGATCTC TTTTTAGCGA AGGGCCGAAT AGTCTCAACC
TCTGGCCGCT TCTTCGATGC CAACTCCGAC TATTACGCCT CACCGCAAAC CATGCTGACC
AATGTGCCTA TGTTAGTGCT GATCAACAAA GGCTCGGCCT CCGCCTCCGA AGTCCTCGCA
GCCGCCCTGC AGGAAAATGG CCGCGCCAAA CTGCTCGGTG AAACGAGCTT TGGCAAAGGC
ACTGTACAAA GCCTGATCCC CATACTGAAC GACGGCAACG CCATCAAGCT CACCATCGCC
CAGTACAACA CGCCCAGAGG GGAAAACATT CACGATATCG GCATAGTGCC CGACATTAAA
GTTACAACCG AAACTGGCTC CAATCAAAAG AATATGGCTA TAATCGACGC CATCTCAGCA
CGAACCGATG TTAGCCAAGA CAGCCTAGTC ACCTCGGCAA TCGCTTGGAT ACAACATCAT
GACTAA
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| Protein sequence | MKQLIRNIVC LGLGLSLGLS ISLSSQENAK SYQSDFDYPL LQDVLETVET YYVKTVSKDE
LVQAAIKGIF EHLDPYSSFL NHQELLDLKD SNRGEYFGFG FEVASDKDHI SIIAPFANSP
AEQAGIQAGD IIIKLNNTPT TETNLADILN QIKQHSINNQ SIRLTLKHRN DAVEFEVSLK
PSTITIQSVA SKLLDGNIGY IRLSSFQENS TEDMVRSLSQ WQNAHLTGLI LDLRNNPGGL
LDQAIKIADL FLAKGRIVST SGRFFDANSD YYASPQTMLT NVPMLVLINK GSASASEVLA
AALQENGRAK LLGETSFGKG TVQSLIPILN DGNAIKLTIA QYNTPRGENI HDIGIVPDIK
VTTETGSNQK NMAIIDAISA RTDVSQDSLV TSAIAWIQHH D
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