Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_0039 |
Symbol | |
ID | 4250655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 41625 |
End bp | 42173 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638116578 |
Product | carbonic anhydrase |
Protein accession | YP_732178 |
Protein GI | 113968385 |
COG category | [R] General function prediction only |
COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000072443 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000629469 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGAGC CACTCAGAAC TTACCAAGGG ATCCATCCGC AACTCGGCGA TAATGTGTAT GTAGACCCAG CTTCGGTACT CGTTGGCGAT ATCGCTTTAG ATACAGACGC CAGTATTTGG CCTATGGTGG CGGCGCGTGG TGACGTAAAC CATATCCGTA TTGGTAAACG CTCCAATGTT CAGGATGGCA GCATATTGCA CGTGACCCGT AAATCAGCCT CTCGTCCTGA AGGTCATCCA CTGCTCATTG GTGATGATGT GACGATTGGG CATAAGGCGA TGCTGCATGG CTGCAAGGTT GGCAATCGTG TATTAGTCGG GATGGGCGCG ATTATCCTCG ACGGTGCCAT ATTAGAAGAT GATGTGATTT TAGGTGCGGG TTCGTTAGTA CCGCCAGGTA AAGTGCTGCA GAGCGGCTAC TTATATGTCG GCAGCCCTGC AAAACAGGCG AGACCTTTAA CCGAAGCGGA ATTGAAGTTT TTACCCGAAT CCGCGGATAA CTATGTGCGC CTGAAAAACG AATACTTGGC TGAACCTCAG CCAGAGTAG
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Protein sequence | MSEPLRTYQG IHPQLGDNVY VDPASVLVGD IALDTDASIW PMVAARGDVN HIRIGKRSNV QDGSILHVTR KSASRPEGHP LLIGDDVTIG HKAMLHGCKV GNRVLVGMGA IILDGAILED DVILGAGSLV PPGKVLQSGY LYVGSPAKQA RPLTEAELKF LPESADNYVR LKNEYLAEPQ PE
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