Gene Shewmr4_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_0039 
Symbol 
ID4250655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp41625 
End bp42173 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content50% 
IMG OID638116578 
Productcarbonic anhydrase 
Protein accessionYP_732178 
Protein GI113968385 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000072443 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000629469 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGAGC CACTCAGAAC TTACCAAGGG ATCCATCCGC AACTCGGCGA TAATGTGTAT 
GTAGACCCAG CTTCGGTACT CGTTGGCGAT ATCGCTTTAG ATACAGACGC CAGTATTTGG
CCTATGGTGG CGGCGCGTGG TGACGTAAAC CATATCCGTA TTGGTAAACG CTCCAATGTT
CAGGATGGCA GCATATTGCA CGTGACCCGT AAATCAGCCT CTCGTCCTGA AGGTCATCCA
CTGCTCATTG GTGATGATGT GACGATTGGG CATAAGGCGA TGCTGCATGG CTGCAAGGTT
GGCAATCGTG TATTAGTCGG GATGGGCGCG ATTATCCTCG ACGGTGCCAT ATTAGAAGAT
GATGTGATTT TAGGTGCGGG TTCGTTAGTA CCGCCAGGTA AAGTGCTGCA GAGCGGCTAC
TTATATGTCG GCAGCCCTGC AAAACAGGCG AGACCTTTAA CCGAAGCGGA ATTGAAGTTT
TTACCCGAAT CCGCGGATAA CTATGTGCGC CTGAAAAACG AATACTTGGC TGAACCTCAG
CCAGAGTAG
 
Protein sequence
MSEPLRTYQG IHPQLGDNVY VDPASVLVGD IALDTDASIW PMVAARGDVN HIRIGKRSNV 
QDGSILHVTR KSASRPEGHP LLIGDDVTIG HKAMLHGCKV GNRVLVGMGA IILDGAILED
DVILGAGSLV PPGKVLQSGY LYVGSPAKQA RPLTEAELKF LPESADNYVR LKNEYLAEPQ
PE