| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0036 |
|---|
| Symbol | |
|---|
| ID | 4250652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 39785 |
|---|
| End bp | 40222 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638116575 |
|---|
| Product | globin |
|---|
| Protein accession | YP_732175 |
|---|
| Protein GI | 113968382 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0572064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00805011 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGC TTAAAAAGAT TTTTAGTAAA CACACAAGCG TGCCGGATGA CAGGGATCCG
AATCAGTCAA ATGCCTATGA TTTAATTGGT GGCGACAAAG TGATCCGCGC GATTGCCAAT
AGTTTCTATA AGAAAATGGC AAGCTCAGAA GAAACGCAAG CCTTATTCGC GATTCACCGT
GCGCCGATTG CGGAGTCGGA ACAAAAGCTC TATGAATTCT TAAGTGGCTG GCTCGGTGGT
CCGCAGTTAT ATCAGCAAAA ATATGGTCAT CCCGCATTAC GCGCACGCCA TATGCCCTTC
GCGGTAGATG AGACGATGCG GGATCAATGG CTATTTTGCA TGAAGTTTGC CATTGAAAAA
CATATAAAAA AGCCAGAGCA TCGCGCCGCT ATCTATGAGG CGATTTCAAC TCTGGCAGAT
CATATGCGTA ATCAGTAA
|
|---|
| Protein sequence | MNWLKKIFSK HTSVPDDRDP NQSNAYDLIG GDKVIRAIAN SFYKKMASSE ETQALFAIHR
APIAESEQKL YEFLSGWLGG PQLYQQKYGH PALRARHMPF AVDETMRDQW LFCMKFAIEK
HIKKPEHRAA IYEAISTLAD HMRNQ
|
|---|
| |