| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0032 |
|---|
| Symbol | |
|---|
| ID | 4250718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | + |
|---|
| Start bp | 36948 |
|---|
| End bp | 37424 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638116571 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_732171 |
|---|
| Protein GI | 113968378 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2922] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.263953 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00416166 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATA TCCTCATGTA TCTATTTGAA AACTATGTTC ACAGTGAAGT TGAACTGTTA
GTGGATGAAG ACGAGTTAAC CAAGGAACTC ACTCGTGCTG GTTTTCACCA GTCAGAGATT
TTGAAAGCCT TAACTTGGTT GGAGCGTCTG GCTGAGTTGC AGGAAGGAGA TAAGCCTTAC
CTGTGTAATC ATGATCAGCA TTCATTTCGG ATTTACACCA AAGAAGAAAT GGAAAAGCTG
GACGTGGAAT GCCGTGGATT CCTGCTATTT TTAGAGCAAG TGAAAGTGCT GAATGTCGAA
ACCCGTGAGA TGGTAATCGA CAGAGTTATG GAGCTCGATG AGCCTGCCTT GATCCTCGAA
GATCTTAAGT GGGTGATTCT GATGGTGCTC TTTAATGCGC CCGGCCATGA GTCCGCCTAT
GAGCAAATGG AAGATTTAAT TTTTGAGCAG CCTGAAGAAG GTCGGCTACA TTCTTAA
|
|---|
| Protein sequence | MFDILMYLFE NYVHSEVELL VDEDELTKEL TRAGFHQSEI LKALTWLERL AELQEGDKPY
LCNHDQHSFR IYTKEEMEKL DVECRGFLLF LEQVKVLNVE TREMVIDRVM ELDEPALILE
DLKWVILMVL FNAPGHESAY EQMEDLIFEQ PEEGRLHS
|
|---|
| |