| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0015 |
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| Symbol | |
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| ID | 4250614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 18661 |
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| End bp | 19464 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638116554 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_732154 |
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| Protein GI | 113968361 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000022055 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGAGGC AAGGTATTTA TCAGGCAGTT GCTCGAATGG AAAGTCGTAG AGCTGAGCTA
TCGGTCATCA AAGACTGGGT CCAGTACTGG CGTAAATATA TGCCAAGGTT AGGGGCCCGT
AAGCTCTACA CGTTGATAAA ATCCAAGCTG GTTGAGCACG ATATTAAACT CGGGCGAGAT
GGGTTCTTTA CCTATTTGAG AAGTGAAGGT TTACTGGTTA AACCGAAGAA AAGCTACACA
AAAACCACGT TCAGCAAACA CTGGATGAAG AAGCATCCTA ATTTGCTGAA AGAGGAAGGA
CTGCATGATG CAGGGCATGT ACTGGTCAGT GATATCACCT ATCTTGAGTC AGACCAAGGT
GTGCACTACC TGTCACTGGT CACCGATGCC AGTTCTCGTA AGATAGTCGG TCATCACGTG
AGTAAAGACA TGAAAGCCGA GAGTGTGGTG AAAGCGTTAA AAATGGCCAT AAAAGATAAA
CGCTATATCG GCAACGCAGT GCATCACTCA GACAGAGGTT TACAATACTG CTCAGCAGTT
TATCAGAATG CGCTTCAGGC GAGCCAAATC CAGCCGTCAA TGACGGATGG TTATGATTGC
TACCAAAATG CATTGGCAGA AAGAGTGAAT GGCATACTGA AGCAGGAGTT TTTACTGCAC
CGATGTAGGA CATTTGCGGA GCTGAAGATA CTTGTTAGAG AATCGATAGC AATATACAAC
GATATGAGAC CGCATCTGAG TTTGAATATG GCAACCCCTA ATCAGGTGCA CAATAGAAAA
GGCCAGCTAC TGGAGCTGGC CTAA
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| Protein sequence | MSRQGIYQAV ARMESRRAEL SVIKDWVQYW RKYMPRLGAR KLYTLIKSKL VEHDIKLGRD
GFFTYLRSEG LLVKPKKSYT KTTFSKHWMK KHPNLLKEEG LHDAGHVLVS DITYLESDQG
VHYLSLVTDA SSRKIVGHHV SKDMKAESVV KALKMAIKDK RYIGNAVHHS DRGLQYCSAV
YQNALQASQI QPSMTDGYDC YQNALAERVN GILKQEFLLH RCRTFAELKI LVRESIAIYN
DMRPHLSLNM ATPNQVHNRK GQLLELA
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