| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_0003 |
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| Symbol | recF |
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| ID | 4250602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 2744 |
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| End bp | 3826 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638116542 |
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| Product | recombination protein F |
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| Protein accession | YP_732142 |
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| Protein GI | 113968349 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.029356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000200533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGTCTTA TCCGTCTTAA TATTGATTCT TTTCGCAATA TTCAATTGGC GCAACTGAGC
CCTAGTTCTG GGATCAATCT TATTTATGGC CAAAATGGCA GTGGCAAAAC CAGCATACTC
GAGGCTATTT ACTTTCTCGG AATGGGGCGT TCGTTTCGCA GTCATTTATC CCAACGGGTG
ATCAATAACG AACAGGATAA GTTAACCCTG TTTGCGACCT TAAATTTGCC CCGTGGCGAC
AGTAAAATCG GCTTGCGACG TTTCCGGAGT GGCGAAACCG AAGTCAAAAT CGACGGGGAA
AAGGTGAAAC GGCTATCGAC CTTAGCCGAA ACTTTACCTA TCCAAGTGAT CACGCCGGAA
AGCTTTTCGC TCCTGTTTGA AGGACCTAAA TCCCGTCGAC AGTTTATCGA TTGGGGCGCC
TTTCATTCTG ATCCACAGTT TTATGCGGCA TGGGTGAATG TAAGACGGGT GCTAAAGCAA
CGAAATCAAT TGCTTAGAAA TAACTCTTCC TATGATCAAA TCCAATATTG GGATCGGGAG
TTTGTCCGTT ATACCGAGCA GGTCACAGAA ATACGAAACC GTTATGTAGA CTCGTTAAAT
GAGCTACTTA AGGGTATAAT CGGGGAGTTT TTACCGCAGG TAGATGTTAA GGTTTCATTT
ACCCGCGGCT GGGATAGCAA AACGGATTTT GCACAACTTC TCGAATCCCA ATATCCCAGA
GATTTGGCTA CGGGTCATAC CGTCAGCGGT CCCCATAAAG CTGACCTCAG ACTTCGTGTA
GGTAGTTTAC CGGCGCAGGA TGCCCTGTCC CGTGGTCAAT TGAAATTATT AGTCTGTGCA
CTGCGTATTG CACAGGGAAA GTTGCTCAAA CAACAAATAG ATAAACACAG TATTTATCTT
GTGGATGATC TTCCATCCGA GTTGGATGCA CAGCATAGGC AGCTATTGCT TAAGCAGCTA
GTGGACACAG GTGCGCAAGT GTTTGTCACT GCCATTGAGC CTGCAGCAAT AGTCGATTCG
TTACACACGC CTCCCAGTAG GATGTTCCAT GTGGAACAGG GACGTGTAAC GGTAATTGAA
TAA
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| Protein sequence | MSLIRLNIDS FRNIQLAQLS PSSGINLIYG QNGSGKTSIL EAIYFLGMGR SFRSHLSQRV
INNEQDKLTL FATLNLPRGD SKIGLRRFRS GETEVKIDGE KVKRLSTLAE TLPIQVITPE
SFSLLFEGPK SRRQFIDWGA FHSDPQFYAA WVNVRRVLKQ RNQLLRNNSS YDQIQYWDRE
FVRYTEQVTE IRNRYVDSLN ELLKGIIGEF LPQVDVKVSF TRGWDSKTDF AQLLESQYPR
DLATGHTVSG PHKADLRLRV GSLPAQDALS RGQLKLLVCA LRIAQGKLLK QQIDKHSIYL
VDDLPSELDA QHRQLLLKQL VDTGAQVFVT AIEPAAIVDS LHTPPSRMFH VEQGRVTVIE
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