Gene Shewmr7_4036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_4036 
Symbol 
ID4250551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008320 
Strand+ 
Start bp912 
End bp1604 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content40% 
IMG OID638116532 
Productinitiator RepB protein 
Protein accessionYP_732132 
Protein GI113951723 
COG category[L] Replication, recombination and repair 
COG ID[COG5527] Protein involved in initiation of plasmid replication 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value0.937889 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTCTA AACTAACAGT AACAAAATCA AATCTTCTCA TTGATGCCAG TTACAGGCTG 
AATGTACAGG CTCAAAAGTT GGTGCTAGCT TGCCTTTCTA AGATCGATTC GCGCCCAGAT 
TCAGAACCTA AAAAAGAGAT AAAACTCACC GCAATTGAGT TCTCTGAACT AATGGGGATT 
GATATAAAAA ATGCTCACAG GGAGCTATAC AAAGCCGCTG ATGCCCTTTT TAAATCGAGC 
ATTTTATTAC GTAATGAACA TGAAGAAACT GAACTTTACT GGATTCAAAA GAAAGTCAAA 
AAACTGCGCG GAGAAGGGGC TGTAACGCTG GTATGGTCAG ATGAAGTTTT ACGTTATATT 
TGCCAGCTAA AATCGCACTT CACCTCCTAC AAACTGCGTA ATATTGCTAG CTTGCAATCA 
GGGCACAGTA TTCGCCTATA CGAGCTACTA ATGCGTTTTA ACGCTACCAA TAGTCGAGTG 
ATTGCCCTAG ACGATTTCCG TTCAGCTTTG GGCCTGGAAG AGAAATACCC TCAGTTCAAA 
GAGCTAAATA AATTCGTTAT AAAATTTGCC GTTGAAGAGC TTAATCAACG TAGTGACTTG 
GTTATCACAT ACGAGACGCT CAAGAAAGGA CGAACAGTGA CAGCGTTAGC TTTTACATTC 
AAACAAAACA AGCAACTGAA AATGGATTTA TAA
 
Protein sequence
MNSKLTVTKS NLLIDASYRL NVQAQKLVLA CLSKIDSRPD SEPKKEIKLT AIEFSELMGI 
DIKNAHRELY KAADALFKSS ILLRNEHEET ELYWIQKKVK KLRGEGAVTL VWSDEVLRYI 
CQLKSHFTSY KLRNIASLQS GHSIRLYELL MRFNATNSRV IALDDFRSAL GLEEKYPQFK 
ELNKFVIKFA VEELNQRSDL VITYETLKKG RTVTALAFTF KQNKQLKMDL