| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_5078 |
|---|
| Symbol | |
|---|
| ID | 4246733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | - |
|---|
| Start bp | 7748596 |
|---|
| End bp | 7749579 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 638109878 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_724454 |
|---|
| Protein GI | 113478393 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAAA CTTTATTATT TAATGCTCTC CGTGCAGCTA TTGATGAAGA GATGGCTCAC
GACCCAACTG TATATGTTCT TGGTGAAGAC GTAGGTCACT ATGGAGGCTC CTACAAAGTG
ACCAAAGGTC TTTATGAAAA ATATGGGGAA CTACGTATTC TTGATACTCC TATTGCAGAA
AATAGCTTTA CAGGAATGGC TATAGGTTCA GCCCTGACTG GACTACGGCC TATCATTGAA
GGCATGAATA TGGGATTTTT ATTATTGGCC TTTAACCAAA TTGCCAATAA TGCTGGAATG
TTACGCTATA CCTCTGGTGG TAATTTCAAA ATTCCATTAG TGATTCGTGG CCCTGGTGGT
GTGGGTCGTC AGTTAGGTGC AGAGCATTCC CAAAGATTAG AAGCCTATTT TCAAGCTGTT
CCTGGTCTTA AAATAGTAGC TTGTTCAACT CCATACAACG CCAAAGGTTT ACTTAAATCA
GCTATCCGTG ATGAAAATCC GGTCTTATTT TTTGAGCATG TCCTTCTTTA TAATCTCAAA
GAAGACTTGC CAGAAGATGA GTATTTGTTA CCTCTAGATA AAGCAGAAGT GGTACAAACT
GGAAAAGATG TTACTATCTT GACCTATTCG AGAATGCGTC ATCACGTTAC CCAAGCAGTA
CAAACTTTGA AAAAACAGGG TTATGACCCG GAGGTAATAG ACCTCATATC TCTCAAACCT
TTAGATTTTG AAACTATTGG TGCTTCTATT AAGAAAACTC ACCGGGTGAT TATTGTTGAA
GAGTGTATGA AAACAGGTGG TATTGCTGCT GAGTTAATTG CCTCAATTAA TGAAAAATTA
TTTGATGAAC TAGATGCTCC TATTTTACGA TTGTCTTCTC AAGACATTCC TACACCTTAT
AATGGTTTAC TTGAAAGATT AACAATTGTA CAACCAGAGC AAATTGTTGA AGCAGTACAA
AAAATGGTGG CAATTAAAGT TTAA
|
|---|
| Protein sequence | MAQTLLFNAL RAAIDEEMAH DPTVYVLGED VGHYGGSYKV TKGLYEKYGE LRILDTPIAE
NSFTGMAIGS ALTGLRPIIE GMNMGFLLLA FNQIANNAGM LRYTSGGNFK IPLVIRGPGG
VGRQLGAEHS QRLEAYFQAV PGLKIVACST PYNAKGLLKS AIRDENPVLF FEHVLLYNLK
EDLPEDEYLL PLDKAEVVQT GKDVTILTYS RMRHHVTQAV QTLKKQGYDP EVIDLISLKP
LDFETIGASI KKTHRVIIVE ECMKTGGIAA ELIASINEKL FDELDAPILR LSSQDIPTPY
NGLLERLTIV QPEQIVEAVQ KMVAIKV
|
|---|
| |