| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_5076 |
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| Symbol | secF |
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| ID | 4246731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Trichodesmium erythraeum IMS101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008312 |
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| Strand | - |
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| Start bp | 7744449 |
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| End bp | 7745435 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638109876 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_724452 |
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| Protein GI | 113478391 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAA ATATTATTAA ACAGCGATCG CTTTGGTGGA CAATTTCAGG GTCTATTATA
CTTTGTGGTT TAATTGCTAT GGCCATTTCT TGGACTCGGC CAGATATTAG TGCCCCCTTA
CGTCCAAGTT TAGATTTTGT TGGCGGTACT CGGTTACAAC TAGAATTAGA TTGCACTATA
CCCAATAACT GTAATCAACC TATCAAAGTT GCTGCTGTCA GAGAAATAAT AAGCAAGGAA
GGTTTCCCTA ACAGTAAGAT TCAAGTTGTA GGAGAAGAGA AAGAAGCTAT TGACATACGC
ACAAAAACTT TAGATGTTGA TACTCGAACT CAGTTAATAA CTGCTTTAAG TACAGAATTT
GGTAAATTTG ACCCAGATTC TACTCAAATT GATACAGTCG GTCCTACTTT AGGACGACAA
ATTTTTACCT CTGGACTATC AGCTCTACTG GTTGCTTTTT TTGGTATTAC AATATATCTG
ACTTTTAGGT TTCAGTTTGA CTATGCCGTA TTTGCTTTTG TTGCCTTATT TCACGACATA
TTAGTTACCG TTGGCATTTT CTCAATTCTT GGTTTGGTCG CCGGTGTGGA AGTAGATAGT
TTATTTTTGG TTGCTCTATT AACTATTATT GGATTTTCTG TTAATGATAC AGTAGTAATT
TACGACCGAG TTCGGGAAGT AATTAAGCGC TATCCAGGTA AACCAATTAA TCAGATAGTT
GATGATGCCG TCAATCAAAC TTTAACACGG TCAATTAATA CCACTGTAAC TACTTTATTA
CCTTTAGTTG GTATTCTTAT ATTCGGTGGA GAAACTTTAA AATATTTGGC TTTGGCTTTA
ATTATTGGTT TTGTGGCAGG TTCTTACTCT AGTATATTTA TTGCTAGTAC GCTTTTAGCT
TGGTGGCGTG AGCGTATTGG AGAATTTATC CCCAACCCCT TAGAAGAAAA TTCACAGTTA
ATAGAAGGTC AAAAGGATAC TGTTTAA
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| Protein sequence | MKINIIKQRS LWWTISGSII LCGLIAMAIS WTRPDISAPL RPSLDFVGGT RLQLELDCTI
PNNCNQPIKV AAVREIISKE GFPNSKIQVV GEEKEAIDIR TKTLDVDTRT QLITALSTEF
GKFDPDSTQI DTVGPTLGRQ IFTSGLSALL VAFFGITIYL TFRFQFDYAV FAFVALFHDI
LVTVGIFSIL GLVAGVEVDS LFLVALLTII GFSVNDTVVI YDRVREVIKR YPGKPINQIV
DDAVNQTLTR SINTTVTTLL PLVGILIFGG ETLKYLALAL IIGFVAGSYS SIFIASTLLA
WWRERIGEFI PNPLEENSQL IEGQKDTV
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