Gene Tery_5047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_5047 
Symbol 
ID4246702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7707694 
End bp7708563 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content38% 
IMG OID638109852 
ProductHEAT repeat-containing PBS lyase 
Protein accessionYP_724428 
Protein GI113478367 
COG category[C] Energy production and conversion 
COG ID[COG1413] FOG: HEAT repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCAGC AATATTTGGA ATTACCATCA TCAGAAGTAT TAGAGAATAA AGAGTCTCTA 
AGTGTGCAAG AAGCGATCGC TAATCTACAA CATGAAGAAT TAGGTAAACG ATATTATGCT
GCCTGGTGGT TAGGTAGGTT TAGAGTTAAT ACTCCCGATG CTATTGAAGG TTTGGTTGCT
GCATTGAAAG ATGAGTCTGA CCGTACAGAA AACGGTGGAT ATCCCCTAAG ACGGAATGCT
GCTCGCGCTC TGGGTAAGTT AAAAGATAAA AAAGCTGTAC CTGTTTTGAT AGAGTGTTTG
CAATGTTCTG ACTATTATGT ACGAGAAGCA GCAACAGAAG CATTAGAAAT GTTAGGAGAC
CCTAGTTGTA TTTCAGCGTT AATCAAACTT TTAGACGGAG GTGTTGAAGC TGCAGTTTTA
TTTCCTGGTA AACCTCATTT GATTCAACCC TACGAAAATA TTATCGAAGC TTTAGGAACA
CTACAGGCTG AAGAAGCAAT TTTTCTAATT AAGCCTTTTA TAGAACATCC TTCAGAAAAA
GTACAATATG CTGCTGCTAG GTCTTTGTAT CAACTTACAG GAGAGGTAGT ATATGGAGAA
TATTTGACTC AAGCATTAGA GGGTGATAAC TTACATTTAC GACGCTCCGC ACTATTAGAT
TTAGCAGCTA TTGGTTATTT ACCGGCAGCT AAGGCAATAT CAGAAACTTT AGCCGAAAAT
AGTATGAAAT TAATTGCTCT GAAAGGACTT TTAGAGCATC ACCTTACAAT AAATTCAAAA
GTTAAAACTC AAGAGTCAAA GGTAGGATCT CAACTATTAT TATCGGATGA GGCTATTGAG
GTAATGACTC TAATGGACTC GCTTCTATAA
 
Protein sequence
MEQQYLELPS SEVLENKESL SVQEAIANLQ HEELGKRYYA AWWLGRFRVN TPDAIEGLVA 
ALKDESDRTE NGGYPLRRNA ARALGKLKDK KAVPVLIECL QCSDYYVREA ATEALEMLGD
PSCISALIKL LDGGVEAAVL FPGKPHLIQP YENIIEALGT LQAEEAIFLI KPFIEHPSEK
VQYAAARSLY QLTGEVVYGE YLTQALEGDN LHLRRSALLD LAAIGYLPAA KAISETLAEN
SMKLIALKGL LEHHLTINSK VKTQESKVGS QLLLSDEAIE VMTLMDSLL