| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tery_5023 |
|---|
| Symbol | |
|---|
| ID | 4246678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Trichodesmium erythraeum IMS101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008312 |
|---|
| Strand | + |
|---|
| Start bp | 7676243 |
|---|
| End bp | 7680283 |
|---|
| Gene Length | 4041 bp |
|---|
| Protein Length | 1346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 638109832 |
|---|
| Product | multicopper oxidase, type 2 |
|---|
| Protein accession | YP_724408 |
|---|
| Protein GI | 113478347 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.805273 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.733827 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA TTGCACTACG AGACGCTAAG ACTATTGGTC AAGAAAACTT TGAATCATGG
AGTAAAGGCT TTAATCCAGA TAATTATCTT GATGTATTGC CTCACCCAGA TAAAGTAGTT
CCCTTTTATA ATCCAATTGA AGAGTGGCAA AATAACCCAG AAGCAAGCAC CGGAGATTAC
TTTTCGAGCT GGGGCCCAAA TGAGGTATTA GAAGCACAAA TCTCAATGGA AGAGGTAGAC
CAATTAGAGG TACCAGGGCT GGGAATTCTT AGGTCAGGAG ATGGTAGAGT ACCGTGGTTA
CCCAGTCCTA TTGATGGAGA ACCTAGCTAT ACTCCTTATG AAGCACTTAG AGTCTATCAG
GGTAAGGGTC CTGATGGTAC AGCTTTGGAC CCTAGAATTC CTGGACCATT GTTCATTACT
GAACCAGGGG ACAAAGTAAA ACTTACTCTG ACAAATAATT TAACTAAAAT AGAAGAAGCA
GGAAATCACG CAGCTAATGT ATTCTCTAAC ATACATACCC ACGGTTTCCA TACATCTCCT
AGGGGTCGTG CTGATAATGT GCTACATTTA ATAGATTCTG GAGAAACCTT TGAATATGAT
ATTCAGGTTC CCACAGACCA AACTTTGGGT ATGAGCTGGT ATCACCCTCA CTTTCATGGA
CAGACTAATA CCCAACTAGC AGCGGGGTTA GTCGGAGTAA TGCAAGTTAA CCCTAGATTC
GATGAACCAG ACCTAAATAA ATGGGACCCA AGCTCAGAAA ACTTCTATTT GATGACCCTT
AATACTTTTG GCCTTCAGCA AGTAGATCGA AAAGGTTCAC CAGACGACCC ACTCAACCAA
AACCCTAATA TTTCATTACC TGCAGGTACA CCTATAGAAA TCCAGGGATT TACGGATAAT
GGTGACCCCA TTTATGAGCT ATCGGATGCT CCATTTATAG GTTACAATGC ATTACCAGAT
CTCTATGACC CCGAACGACC TCTGGGTAGA AACGAAGATG GTACAAATAA TCCCAATCTA
TTTGAATATG GCGGTGGTGT TTTAGAGGCA CCAGCAGAAA ACGTTATTCA CACTATTAAT
GGCCAATACA ATCCCACACT TGAATTAAAG ACTGGTGAGT TACAAACATT TTCACTCTTG
AATGCAGATG TTAATTCTCA CCATATACTT CAGTTATACA AAGAAGGGAT TGATGATGAT
GGTAATGTAA TTCTTACCCT CCAGGAAATG ACTTATGTAG GTCTTGATGG TGATTCTTTT
CCAGGTCGGG CGACAGAAAA AATCCGCAGA ACTATGGAGG ATTCACCAAT CTTTCAACCA
GGGCAACGGA TAACTATAGA TCATTCTTTT GAAGAACCAG GTAAGTATTA TTTACTCTCT
AATGGTACCC CAGAAATTGT TGGTGAAGAT AGCCCAGAGT TGATCCAGAC AATGACCAAT
AAATTAAAAG AAGGCCAGAA ATCTCAAGGA TTTGATGATG GTCACTATAC TTGGGGACCC
CAGGTTTTGA TGACCTTTGA TGTAACGGGT CTAGAAAATG AGGCTAGTCC TATTCCAGAA
GCCTATGATA GCCTAGCAAC AAGAGTTGAA GCACTGATAG AAAGAGTAGA TTCAGCTGAG
AATGGTATTG GTGTACAACG GGAACGCACA TATATCTGGA GTGCAAATAT TGGTGGCGCG
ATCGCTGAAG GCAATGCTCC AGATGACCTA GAAGTAAAGA CATTTGAGGG AACTTATAGA
ATTAATGGCG GGTATTTTGC AGGAGGAAAT GAGACTCCAC TGACAATGCC TATGTTAGGT
ACAGCGGAAA TATGGAATGT TTTTAACATC TCTGGGTTAA AAGAAGAAAG TTTTACTCCA
GATCTTCCCC TCTTAGAATG GCATCCATTC CACATTCACC AAAATCCTTT TACAGTTTTA
GATATTAACG GTAAGCGACT AGCAGATTTA AATAATACCT ATCTACCTTA TATAGAAGGG
GATACCATTG CTCTACCTCC CACTTATCAG GATGGTACAG TTACAGACAC GAACCCATAC
GGTGTAGCAG AAACTGATGG TGATGCTTCC TTGGTCAGAA TTTATATGCA GTTCAAAGAC
TATGACGGTA GCTTTGTTAA CCATTGTCAT ATTCTGTTCC ATGAAGATGC AGGTATGATG
GCAGTTGTGC GGGTGATTTT GAATACAAAT GATACTTGGT TGGGTTTGAG CAATGAAGAA
GGAGATGCTG ATGGTACAAG TATAGAACTA CTCCGGGGTA GTGGTATAAC AGGACCAAGC
CTTAATTTGA GACCTTTTGG TTCAAATTTC ACAGGTGGGG TAGATATTAA TATTGATGAT
GTTAATTCCT TGCTACCATT TAACGGCAAT AATGTTACGG ATAATGTTAC TGATGTTGTT
GCTATGGAGA TTGAAGGAGA TCATACAATT CGAGTATTTG ATGGTAGGTC ATTATTTAAT
CTCCAAGAAC AAGGTATAAC AGATGTTGAT GGTGATAATA CTAGCTTACA AATTACTCAA
TTTAATCCTT TTCAAGGAGT AAATAATATT GAGGGAGAAA AAGGATCTGT TGCTACTGGT
GATATTAATG GGAATAACTT TGCTGACATA GTTACTGGTA TCGTTACAGA AGACGGGGTC
TCTATTGAGA TTTACGATGG TGGCGATTTT CAGCTGCTTA CCCGTATACT TGTGGATGGA
TTAACCTCTA ATGAAGATGA TTTAGAGAAT AATCTCAATA TAGCAGTGGG AGATGCTAAT
GGAGATAACT TTGATGATAT CTATATCACC AATAAGGGCA AATTAACGAT TTTAAATGGT
ATTGATATTG AGAAAAAGAT CAAGCTAGAT GAAAATATTG ATGGGAGTGA TGTAGTAGTA
ATAGATGCTG TTAGTCCCTA TGAAAATTAT ACAGGGGAGA TTGAGATTAC CTCTGGTTAT
CTACTGCAGC GACCTGAACC TGAAGATGAT ATTGTTCCTA CTTCTGATTT TGATTTGTCT
AAGGAAGCTT TTAATACTAC TGTTCAAACT AATTCTGCTA ACATTACTAC ATTGGCTGTT
GACAAAGAAC AGTTAGCAGA GAGTGAAGAG CAGGTGAAGG TTTGGACTTA CACTGGAGGA
GGGCACCACG GACATGGAGG AGATGATGGT AAACATGGTG AGGGTAAACA TAGTGATGAT
GACATGAAAA CCATGGATGA CATGGAAATG AGTCAGGCAG GGGACTCAGA GATGGAAATG
AATGATGAGG CTAAAGAAGG AAAGTCTGCT CCGCCAATTC GTCTAGATGC TGAATTTACT
CCTGAAAGTG ATATTAAAAA TTTATCTGGT ACTTTTGCTG ATGTCCCTGG TCATCAACGA
GGCGAACCAG TTTTATTTGT TCAAAATAAA GAAGGGATCC GGGAGATACT TCAGCTCCGG
GATGGAAATC TCTTGGCAGA AAATAAAATT GGTACGACAG GAAATAATCT CATTAATGGA
GACAATAATG GTGACAATAT CTACGGACTG GAAGGAGATG ATACCCTTAA TGGTAATTTT
GGAAACGATT TGTTATACGG TTTTCGAGGT ATAGATTCCC TTAATGGTGG TGCAGGAAAT
GATTCTTTTC GTGGTGGAAA AGATGAGGAT ACTCTAAGAG GTGGAGAAGG ATCGGATGTT
CTTAATGGGG AAGAAGGAAA TGATATCCTA ATAGGTGGAG AAGGTTCCGA TATATTTGTC
TTTGATACTG ATGAGATATT TGATCCTGAA ATTTTAGGTA TTGATTCAAT AACTGACTTT
AATGCATCAA AAGATTTAAT CGAACTTGGA GCTATGAGTT TTACCAAATT TGAGACAACA
GAAGATATAC AGAAGAATTT TGCTGTTGTT TCTAGTAATA GTGATGCTGC TACATCAGAA
GGATTGATTG TTTACAGTAG TCAAAGCGGT AATTTGTACT ATAATACTGA TGGTACGGCT
CCTGGTTTCG GAAGTGGCGG TCAATTTGCT ACATTAGAAG GTAATTCAGA CTTGGCCGCT
AAGAACTTTA TCTTGGGTTA G
|
|---|
| Protein sequence | MADIALRDAK TIGQENFESW SKGFNPDNYL DVLPHPDKVV PFYNPIEEWQ NNPEASTGDY
FSSWGPNEVL EAQISMEEVD QLEVPGLGIL RSGDGRVPWL PSPIDGEPSY TPYEALRVYQ
GKGPDGTALD PRIPGPLFIT EPGDKVKLTL TNNLTKIEEA GNHAANVFSN IHTHGFHTSP
RGRADNVLHL IDSGETFEYD IQVPTDQTLG MSWYHPHFHG QTNTQLAAGL VGVMQVNPRF
DEPDLNKWDP SSENFYLMTL NTFGLQQVDR KGSPDDPLNQ NPNISLPAGT PIEIQGFTDN
GDPIYELSDA PFIGYNALPD LYDPERPLGR NEDGTNNPNL FEYGGGVLEA PAENVIHTIN
GQYNPTLELK TGELQTFSLL NADVNSHHIL QLYKEGIDDD GNVILTLQEM TYVGLDGDSF
PGRATEKIRR TMEDSPIFQP GQRITIDHSF EEPGKYYLLS NGTPEIVGED SPELIQTMTN
KLKEGQKSQG FDDGHYTWGP QVLMTFDVTG LENEASPIPE AYDSLATRVE ALIERVDSAE
NGIGVQRERT YIWSANIGGA IAEGNAPDDL EVKTFEGTYR INGGYFAGGN ETPLTMPMLG
TAEIWNVFNI SGLKEESFTP DLPLLEWHPF HIHQNPFTVL DINGKRLADL NNTYLPYIEG
DTIALPPTYQ DGTVTDTNPY GVAETDGDAS LVRIYMQFKD YDGSFVNHCH ILFHEDAGMM
AVVRVILNTN DTWLGLSNEE GDADGTSIEL LRGSGITGPS LNLRPFGSNF TGGVDINIDD
VNSLLPFNGN NVTDNVTDVV AMEIEGDHTI RVFDGRSLFN LQEQGITDVD GDNTSLQITQ
FNPFQGVNNI EGEKGSVATG DINGNNFADI VTGIVTEDGV SIEIYDGGDF QLLTRILVDG
LTSNEDDLEN NLNIAVGDAN GDNFDDIYIT NKGKLTILNG IDIEKKIKLD ENIDGSDVVV
IDAVSPYENY TGEIEITSGY LLQRPEPEDD IVPTSDFDLS KEAFNTTVQT NSANITTLAV
DKEQLAESEE QVKVWTYTGG GHHGHGGDDG KHGEGKHSDD DMKTMDDMEM SQAGDSEMEM
NDEAKEGKSA PPIRLDAEFT PESDIKNLSG TFADVPGHQR GEPVLFVQNK EGIREILQLR
DGNLLAENKI GTTGNNLING DNNGDNIYGL EGDDTLNGNF GNDLLYGFRG IDSLNGGAGN
DSFRGGKDED TLRGGEGSDV LNGEEGNDIL IGGEGSDIFV FDTDEIFDPE ILGIDSITDF
NASKDLIELG AMSFTKFETT EDIQKNFAVV SSNSDAATSE GLIVYSSQSG NLYYNTDGTA
PGFGSGGQFA TLEGNSDLAA KNFILG
|
|---|
| |