Gene Tery_5002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_5002 
Symbol 
ID4246657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7643358 
End bp7644101 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content38% 
IMG OID638109813 
Productphosphonate C-P lyase system protein PhnL 
Protein accessionYP_724389 
Protein GI113478328 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4778] ABC-type phosphonate transport system, ATPase component 
TIGRFAM ID[TIGR02324] phosphonate C-P lyase system protein PhnL 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAATT CAAAAGCCCA ACAAGCAAGA GTTTTATCAA TCAAAAATAA TTCTCCTTCA 
GACTTAATTT TACAAGTGAA GGAGCTGACC AAAAACTTTA ACTTGCACGA ACAAGGTAAA
ATTTTACCTG GTATCCCAGC AATTTCATTG ACTGTGAAGT CTGGACAGTT AACCGCCTTA
ACAGGAGTTT CGGGAGCGGG AAAATCTAGT TTATTGAAAT GTATTTACCG CAGTTATTTG
CCTCAGAGTG GAGAAATTCA TTATTATACA GCAGAAGGAA ACTGGATTGA TATCGCTACT
GCTAAAGAAT ATGAAATCCT AAATTTGCGG CGCCAAGAAA TCAGTTTTGT TACCCAGTTT
TTGCATTGTC TGCCTCGTCA AACAACTCTG GATGTGGTAG CTAGACCCCT ATTTGATTTG
GGATATGAAC GTTCGGAAGC TAGGAATAAA GCAGCAATCT TATTAAAAAA AATGCAGTTA
CCAGAAAGGT TGTGGACAAT TTCTCCAGCT ACTTTTTCAG GAGGGGAAAA ACAGCGAGTT
AATTTAGCTC GGGGAATAGT GTCGTCTCCT CGTTTGCTTT TACTGGATGA GCCAACAGCT
AGTTTGGATG CAGATACCAG TCAGTTAGTT ATTGAGTTGA TTCAAAGTGT TAAACAAATG
GGTGCTGGAA TACTTGCGGT TTTTCATTCT CCAGAGTTAA TTAATATCTT AGCTGATAAT
GTGGTAATGG TTGAATCAGG TTAA
 
Protein sequence
MLNSKAQQAR VLSIKNNSPS DLILQVKELT KNFNLHEQGK ILPGIPAISL TVKSGQLTAL 
TGVSGAGKSS LLKCIYRSYL PQSGEIHYYT AEGNWIDIAT AKEYEILNLR RQEISFVTQF
LHCLPRQTTL DVVARPLFDL GYERSEARNK AAILLKKMQL PERLWTISPA TFSGGEKQRV
NLARGIVSSP RLLLLDEPTA SLDADTSQLV IELIQSVKQM GAGILAVFHS PELINILADN
VVMVESG