Gene Tery_5000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTery_5000 
Symbol 
ID4246655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTrichodesmium erythraeum IMS101 
KingdomBacteria 
Replicon accessionNC_008312 
Strand
Start bp7641590 
End bp7642537 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content42% 
IMG OID638109811 
Productphosphonate metabolism PhnJ 
Protein accessionYP_724387 
Protein GI113478326 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3627] Uncharacterized enzyme of phosphonate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00558671 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCCA TTGCCAAATC ATTCCTTCCT GATATACAGC CTAATTTATT AGCAGTTAAT 
TCCCAAGACC AGAGCCCCAC CTATCAATTT GGGTTCCTCG ATAGTTTTGC GAAAAAGGAA
ATTCGCCGTA GCTTACTCAA AGCTGTAGCT ATTCCTGGTT ATCAAGTACC CTATTCCTCT
CGGGAAATGC CTATTGCCCG TGGTTTCGGC ACTGGTGGCT TGCAAATTAC CTTATCTCTT
TTGGGCAAAG ATGATGTTTT GAAAGTTATC GACCAGGGCA GCGATGAATC GGTAAATGCT
GTAAATATCC GTAATTTTAT CAGCAAAACT TGTCCGGGGG TATCCCTCAC AAAACATACT
CCTGAAGCAA CTATCATTCA AACTCGTCAT CGCATCCCTG AGTTTCCTCT CAAGTTAGGG
CAGGTGTTAG TACTACAAGT ACCTTACCCA GATCCATTGG TAATTGTGGA AGCTAGCGAA
GCCAAGCGCA AACAAATGCA TGGAGAAGGG GATTATGCTA GATTGTGGGT CAAACTCTAT
GAAGATATGG TTAAATTCTC TGAAATTACC ATTTCTCATC GCTATCCCAC TCGCATTAAT
GGACATTATG TTATCGATCC CTCTCCCATA CCTCGTTTTG ATGTACCCAA ACTCCACCAA
TCTTTTGGAC TACATCTATT TGGAGCGGGA CGAGAAAAGA AAATCTATGC AGTGCCACCA
TTTACTGATG CTCAACCCCT ATGTTTTGAG GATATTCCCT TTCGGGTGGA GAATTTTGAC
GATGTTGATG GCCGTCGTCG TCCCTGCCAT CGTTGCGGTT CTACTACCAG CTTTTTAGAT
GAGTTTCTGG ATGAGCAAGG TAATTGTATT TATCAGTGTT CTGATAGTGA CTACTGTAAC
ACAATGTTGA TGCAAGCAAA GGAAGATAGT TATGCAACCA ATTCTTGA
 
Protein sequence
MNSIAKSFLP DIQPNLLAVN SQDQSPTYQF GFLDSFAKKE IRRSLLKAVA IPGYQVPYSS 
REMPIARGFG TGGLQITLSL LGKDDVLKVI DQGSDESVNA VNIRNFISKT CPGVSLTKHT
PEATIIQTRH RIPEFPLKLG QVLVLQVPYP DPLVIVEASE AKRKQMHGEG DYARLWVKLY
EDMVKFSEIT ISHRYPTRIN GHYVIDPSPI PRFDVPKLHQ SFGLHLFGAG REKKIYAVPP
FTDAQPLCFE DIPFRVENFD DVDGRRRPCH RCGSTTSFLD EFLDEQGNCI YQCSDSDYCN
TMLMQAKEDS YATNS